COPII-mediated vesicle transport (Homo sapiens)

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25, 5920, 494, 5, 7, 14, 21...11, 5711, 57496, 8, 17, 24, 26...612, 14, 16, 18, 19, 34...1, 9, 35, 37, 40...11, 12, 23, 39, 42...28, 323, 6111, 57, 5930, 32, 55, 6111, 29, 5713, 14, 47, 54transport vesiclecytosolendoplasmic reticulum-Golgi intermediate compartment membraneendoplasmic reticulum lumenAREG precursor RAB1:GTPPalmC-YKT6 Factor VIII precursor CNIH1 3x4Hyp-GalHyl-COL7A1 SEC22C p-SEC24D GRIA1 SEC23A LMAN2 SEC23IP SEC23A SEC24C SEC22B 5Hyl-COL7A1 CNIH3 GOLGA2 SEC31A GalHyl-COL7A1 SEC22A TMED10 GORASP1 TRAPPC2 COL7A1 3x4Hyp-3Hyp-GalHyl-COL7A1 nascent procollagen VII vesicle GOSR2 STX17 3x4Hyp-GlcGalHyl-COL7A1 cis-SNARE:NSFhexamer:3xSNAPGRIA1 TMED2 RAB1B PiSEC24C TMED10 RAB1B SEC24B TRAPPC6B GOSR2 CNIH3 SEC24D GPI-FOLR1 SEC24B TRAPPC10 nascent procollagen VII vesicle SEC24A STX5 Glycoproteins with Man8 N-glycans Factor VIII precursor SEC24A Glycoproteins with Man8 N-glycans p-SEC24A SEC23A COPIIcargo:receptorsSEC16A:SEC16BTGFA precursor MCFD2 TRAPPC10 SEC24D TRAPPC2 PalmC-YKT6 SEC23A TMED10 GPI-CD59 AREG precursor 3x4Hyp-GlcGalHyl-COL7A1 SEC23A GOSR2 STX5 3x4Hyp-3Hyp-5Hyl-COL7A1 GPI-FOLR1 STX17 NAPA 5Hyl-COL7A1 TMED10 COPIIcargo:receptorsCNIH2 3x4Hyp-3Hyp-GalHyl-COL7A1 Glycoproteins with Man8 N-glycans TRAPPC2L PiFactor V precursor 3x4Hyp-COL7A1 CNIH2 GOSR2 TRAPPC5 GOSR2 RAB1A SEC23A GlcGalHyl-COL7A1 AREG precursor GlcGalHyl-COL7A1 STX5 GRIA1 SEC24D GalHyl-COL7A1 5Hyl-COL7A1 TRAPPC6B PalmC-YKT6 GPI-CD59 GOSR2 STX5 GPI-FOLR1 PalmC-YKT6 SEC24D TRAPPC2L SEC24A 3x4Hyp-COL7A1 TMED2 (Glc)3(GlcNAc)2(Man)9-SERPINA1 TRAPPC6B LMAN1L 3x4Hyp-5Hyl-COL7A1 RAB1A TRAPPC6A p-SEC24C (Glc)3(GlcNAc)2(Man)9-SERPINA1 GOSR2 3x4Hyp-5Hyl-COL7A1 nascent procollagen VII vesicle COPIIcargo:receptors:SEC23:SEC24:SEC13:SEC31:SEC23IP:v-SNAREs:TRAPPCII:RAB1:GTPNSF GPI-FOLR1 CSNK1D3x4Hyp-3Hyp-COL7A1 SEC24C ATPLMAN2L LMAN2L PPP6R1 SEC16A TRAPPC1 5Hyl-COL7A1 3x4Hyp-3Hyp-COL7A1 LMAN1 SEC24D SEC23A STX5 SEC24A 3x4Hyp-3Hyp-GlcGalHyl-COL7A1 SEC24C MCFD2 3x4Hyp-3Hyp-5Hyl-COL7A1 CNIH3 Factor VIII precursor SEC22A SEC22A 3x4Hyp-GalHyl-COL7A1 GlcGalHyl-COL7A1 GDP LMAN1 3x4Hyp-3Hyp-5Hyl-COL7A1 GTP CNIH1 3x4Hyp-3Hyp-GlcGalHyl-COL7A1 3x4Hyp-GlcGalHyl-COL7A1 3x4Hyp-GalHyl-COL7A1 (Glc)3(GlcNAc)2(Man)9-CTSC AREG precursor STX17 (Glc)3(GlcNAc)2(Man)9-CTSC GTPTRAPPC6A RAB1B 3x4Hyp-3Hyp-GlcGalHyl-COL7A1 GTP COL7A1 3x4Hyp-3Hyp-COL7A1 SEC24C TRAPPC4 LMAN1 TRAPPC5 (Glc)3(GlcNAc)2(Man)9-CTSZ 3x4Hyp-GlcGalHyl-COL7A1 3x4Hyp-3Hyp-COL7A1 COPIIcargo:receptors:SEC23:SEC24:SEC13:SEC31:SEC23IP:v-SNAREsCNIH1 TGFA precursor SEC24B (Glc)3(GlcNAc)2(Man)9-SERPINA1 MCFD2 3x4Hyp-COL7A1 CNIH1 cis-SNAREGOLGA2 PiAREG precursor TRAPPC10 Factor V precursor TMED10 (Glc)3(GlcNAc)2(Man)9-CTSC MCFD2 CNIH2 GRIA1 ATPAREG precursor SEC23A GOSR23x4Hyp-GalHyl-COL7A1 SEC22A GRIA1 COPIIcargoreceptors:SAR1B:GTP:SEC23:SEC24SEC22C SEC22A TFG TRAPPC6B SEC22B GRIA1 LMAN2 SEC23A GlcGalHyl-COL7A1 Factor VIII precursor LMAN1L CNIH3 GTP3x4Hyp-GlcGalHyl-COL7A1 TRAPPC1 SEC24A COPIIcargo:receptors:SAR1B:GTP:SEC23:SEC24:SEC16A:SEC16B:TFG hexamer:SEC13:SEC31:SEC23IP:v-SNARESSEC31A TRAPPC4 SEC31A 3x4Hyp-3Hyp-5Hyl-COL7A1 USO1 homodimerGORASP1 TGFA precursor LMAN1 LMAN2 CNIH3 GalHyl-COL7A1 SEC24C SEC24C GRIA1 STX5,17SEC23A Factor VIII precursor COPIIcargo:receptors:SEC23:SEC24:SEC13:SEC31:SEC23IP:v-SNAREs:TRAPPCII:RAB1:GDP3x4Hyp-3Hyp-COL7A1 3x4Hyp-3Hyp-GalHyl-COL7A1 GRIA1 PalmC-YKT6 3x4Hyp-3Hyp-COL7A1 3x4Hyp-3Hyp-COL7A1 SEC24C Glycoproteins with Man8 N-glycans CNIH1 SAR1B Factor V precursor GPI-CD59 GPI-CD59 3x4Hyp-3Hyp-GlcGalHyl-COL7A1 TRAPPC6A COL7A1 SEC24C GTP LMAN1L 3x4Hyp-3Hyp-GlcGalHyl-COL7A1 LMAN1 SEC22B 3x4Hyp-GalHyl-COL7A1 GlcGalHyl-COL7A1 3x4Hyp-GalHyl-COL7A1 GOLGA2:GORASP1CNIH1 SEC24B SEC22C (Glc)3(GlcNAc)2(Man)9-CTSC CNIH2 TFG hexamerSEC23A (Glc)3(GlcNAc)2(Man)9-CTSZ ER-to-ERGIC v-SNARESSEC22B SEC24C RAB1A SEC16B TMED2 LMAN1L 3x4Hyp-GalHyl-COL7A1 3x4Hyp-3Hyp-5Hyl-COL7A1 GlcGalHyl-COL7A1 LMAN1L GRIA1 SEC24A 5Hyl-COL7A1 3x4Hyp-3Hyp-COL7A1 TMED2 Factor VIII precursor LMAN2 SEC22A LMAN2L NAPA LMAN2L RAB1A Factor V precursor SEC24D PP6SEC22B TMED10 AREG precursor STX17 TRAPPC2L CNIH2 LMAN2L 5Hyl-COL7A1 MCFD2 TRAPPC1 SEC24B GalHyl-COL7A1 AREG precursor SEC24C LMAN1L SAR1B SEC24D SEC22C TRAPPC9 GalHyl-COL7A1 Factor V precursor PiSEC22C Factor VIII precursor NSF hexamer3x4Hyp-5Hyl-COL7A1 GalHyl-COL7A1 GlcGalHyl-COL7A1 SEC24D GTP RAB1A TRAPPC2 MCFD2 RAB1B PalmC-YKT6 COL7A1 GRIA1 PalmC-YKT6 SAR1B STX5 GPI-CD59 SEC24C (Glc)3(GlcNAc)2(Man)9-SERPINA1 GORASP1 RAB1A TRAPPC3 3x4Hyp-COL7A1 (Glc)3(GlcNAc)2(Man)9-CTSZ 3x4Hyp-GlcGalHyl-COL7A1 RAB1B SEC23A NAPG AREG precursor SEC24D SEC24C GPI-FOLR1 SEC22C 3x4Hyp-3Hyp-5Hyl-COL7A1 (Glc)3(GlcNAc)2(Man)9-CTSC SEC24B TRAPPCIILMAN2L LMAN1 SEC22B LMAN1L GlcGalHyl-COL7A1 TGFA precursor GalHyl-COL7A1 TGFA precursor GDP TRAPPC9 COPIIcargo:receptors:SAR1B:GTP:SEC23:SEC24:SEC16A:SEC16B:TFG hexamerGOSR2 Factor V precursor COL7A1 SEC24D GalHyl-COL7A1 LMAN2L SEC24B GlcGalHyl-COL7A1 CNIH2 TGFA precursor SEC13 SEC24C SEC23A SEC24D 3x4Hyp-3Hyp-GalHyl-COL7A1 SAR1B3x4Hyp-3Hyp-GalHyl-COL7A1 SEC24C LMAN2 GlcGalHyl-COL7A1 (Glc)3(GlcNAc)2(Man)9-CTSZ COL7A1 GTP PalmC-YKT6 CNIH3 3x4Hyp-5Hyl-COL7A1 GPI-CD59 (Glc)3(GlcNAc)2(Man)9-CTSZ TGFA precursor AREG precursor 3x4Hyp-3Hyp-COL7A1 PPP6C p-SEC24SEC22B (Glc)3(GlcNAc)2(Man)9-CTSC TRAPPC1 PalmC-YKT6 SEC31A SEC24D SEC22B SEC22A SEC23A (Glc)3(GlcNAc)2(Man)9-CTSC 3x4Hyp-5Hyl-COL7A1 TRAPPC9 LMAN2L 3x4Hyp-COL7A1 SEC16B SEC16B TBC1D20STX5 GDP (Glc)3(GlcNAc)2(Man)9-CTSZ PREBGlycoproteins with Man8 N-glycans CNIH1 CNIH2 GOSR2 3x4Hyp-3Hyp-GalHyl-COL7A1 SEC24D SEC24C CNIH3 SEC24D 3x4Hyp-3Hyp-GlcGalHyl-COL7A1 3x4Hyp-COL7A1 5Hyl-COL7A1 Factor VIII precursor 3x4Hyp-GalHyl-COL7A1 SEC24C SEC23A MCFD2 GTP TMED10 MCFD2 NAPB SEC13 SEC24A SEC22C GPI-FOLR1 SAR1B:GTPSNAPsGOLGA2 LMAN1L TMED2 3x4Hyp-COL7A1 SEC22B GDPCNIH2 3x4Hyp-COL7A1 3x4Hyp-3Hyp-5Hyl-COL7A1 3x4Hyp-COL7A1 SEC13 LMAN2 SCFD1 3x4Hyp-GlcGalHyl-COL7A1 (Glc)3(GlcNAc)2(Man)9-SERPINA1 LMAN2L SEC23A CNIH3 SEC23:SEC24CNIH1 LMAN1L STX5 CNIH3 p-SEC24B Factor V precursor 5Hyl-COL7A1 SEC13 3x4Hyp-COL7A1 3x4Hyp-GlcGalHyl-COL7A1 RAB1B Glycoproteins with Man8 N-glycans LMAN2 SEC24A 5Hyl-COL7A1 SEC22B RAB1A (Glc)3(GlcNAc)2(Man)9-CTSC Factor VIII precursor LMAN1 3x4Hyp-3Hyp-GalHyl-COL7A1 CNIH3 Factor VIII precursor TRAPPC3 TRAPPC2L STX5 GalHyl-COL7A1 TGFA precursor PalmC-YKT6 3x4Hyp-5Hyl-COL7A1 3x4Hyp-GalHyl-COL7A1 Glycoproteins with Man8 N-glycans GOSR2 SEC22C SEC23A GTP SEC24COL7A1 GDP 3x4Hyp-3Hyp-GlcGalHyl-COL7A1 SEC13 COL7A1 3x4Hyp-3Hyp-COL7A1 SEC23A TMED10 3x4Hyp-GlcGalHyl-COL7A1 SEC23A GPI-CD59 3x4Hyp-3Hyp-5Hyl-COL7A1 p-S742,T747 SEC23A(Glc)3(GlcNAc)2(Man)9-SERPINA1 3x4Hyp-GalHyl-COL7A1 Glycoproteins with Man8 N-glycans USO1 SEC22A SEC31A 3x4Hyp-3Hyp-GalHyl-COL7A1 LMAN2 SEC13 TRAPPC3 SEC24D BET1 TRAPPC2 TGFA precursor MCFD2 NAPG 3x4Hyp-3Hyp-GlcGalHyl-COL7A1 Factor V precursor RAB1B (Glc)3(GlcNAc)2(Man)9-SERPINA1 COPIIcargo:receptors:SEC23:SEC24:SEC13:SEC31:SEC23IP:v-SNAREs:TRAPPCII:RAB1:GTP:USO1 homodimer:GOLGA2:GORASP13x4Hyp-3Hyp-5Hyl-COL7A1 3x4Hyp-GlcGalHyl-COL7A1 STX5 ADPFactor V precursor SCFD1 H2OSEC24D (Glc)3(GlcNAc)2(Man)9-CTSZ LMAN2L TMED10 USO1 GTP SEC22C (Glc)3(GlcNAc)2(Man)9-CTSC SEC23IP CNIH1 3x4Hyp-5Hyl-COL7A1 PPP6R3 LMAN2 TGFA precursor BET1 (Glc)3(GlcNAc)2(Man)9-SERPINA1 SEC16A TRAPPC5 GPI-FOLR1 ANKRD28 NAPB SEC24D COPIIcargo:receptors:v:SNAREs:GOLGA2:GORASP1:USO1 homodimerSTX5 GDPSEC24B TMED2 3x4Hyp-5Hyl-COL7A1 LMAN1 BET1Glycoproteins with Man8 N-glycans TRAPPC5 GPI-CD59 LMAN1 (Glc)3(GlcNAc)2(Man)9-CTSZ NSF (Glc)3(GlcNAc)2(Man)9-CTSZ 3x4Hyp-5Hyl-COL7A1 TMED2 CNIH2 TRAPPC9 USO1 TRAPPC4 TRAPPC10 LMAN1 SEC23A SAR1B 3x4Hyp-3Hyp-GalHyl-COL7A1 3x4Hyp-3Hyp-5Hyl-COL7A1 TFG CNIH1 RAB1:GTP:TBC1D203x4Hyp-3Hyp-GlcGalHyl-COL7A1 SEC24D GPI-CD59 TMED2 SAR1B:GDPTMED2 STX5 TBC1D20 RAB1:GDPSCFD1MCFD2 (Glc)3(GlcNAc)2(Man)9-CTSZ GPI-FOLR1 (Glc)3(GlcNAc)2(Man)9-SERPINA1 SEC22A GOSR2 SEC22A ER-to-ERGIC v-SNARESCOL7A1 RAB1:GDPGPI-FOLR1 SEC24C STX5 SEC31A TFG SEC22C TMED10 GPI-CD59 5Hyl-COL7A1 COL7A1 SAR1B TMED2 Glycoproteins with Man8 N-glycans BET1 TRAPPC3 TRAPPC4 LMAN2 SEC31A:SEC13:SEC23IPGOSR2 nascent procollagen VII vesicle 3x4Hyp-3Hyp-GlcGalHyl-COL7A1 3x4Hyp-3Hyp-GalHyl-COL7A1 GalHyl-COL7A1 3x4Hyp-5Hyl-COL7A1 (Glc)3(GlcNAc)2(Man)9-SERPINA1 STX5 (Glc)3(GlcNAc)2(Man)9-CTSC SEC24B GPI-FOLR1 SEC24C GOSR2 SEC16A SEC24D TRAPPC6A SCFD1 SEC24C Cargo concentrationin the ERFactor V precursor SEC23IP SEC23IP SEC23IP SEC24A LMAN1L SEC23IP SEC24C BET1:GOSR2:STX5:SCFD1CNIH2 10, 15, 23, 38, 39, 42...


Description

COPII components (known as Sec13p, Sec23p, Sec24p, Sec31p, and Sar1p in yeast) traffic cargo from the endoplasmic reticulum to the ER-Golgi intermediate compartment (ERGIC). COPII-coated vesicles were originally discovered in the yeast Saccharomyces cerevisiae using genetic approaches coupled with a cell-free assay. The mammalian counterpart of this pathway is represented here. Newly synthesized proteins destined for secretion are sorted into COPII-coated vesicles at specialized regions of the ER. These vesicles leave the ER, become uncoated and subsequently fuse with the ERGIC membrane. View original pathway at Reactome.

Comments

Reactome-Converter 
Pathway is converted from Reactome ID: 204005
Reactome-version 
Reactome version: 75
Reactome Author 
Reactome Author: Gillespie, Marc E

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Bibliography

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History

View all...
CompareRevisionActionTimeUserComment
114690view16:16, 25 January 2021ReactomeTeamReactome version 75
113136view11:20, 2 November 2020ReactomeTeamReactome version 74
112367view15:29, 9 October 2020ReactomeTeamReactome version 73
101705view14:44, 1 November 2018DeSlOntology Term : 'transport pathway' added !
101269view11:16, 1 November 2018ReactomeTeamreactome version 66
100807view20:44, 31 October 2018ReactomeTeamreactome version 65
100718view20:11, 31 October 2018ReactomeTeamNew pathway

External references

DataNodes

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NameTypeDatabase referenceComment
(Glc)3(GlcNAc)2(Man)9-CTSC ProteinP53634 (Uniprot-TrEMBL)
(Glc)3(GlcNAc)2(Man)9-CTSZ ProteinQ9UBR2 (Uniprot-TrEMBL)
(Glc)3(GlcNAc)2(Man)9-SERPINA1 ProteinP01009 (Uniprot-TrEMBL)
3x4Hyp-3Hyp-5Hyl-COL7A1 ProteinQ02388 (Uniprot-TrEMBL)
3x4Hyp-3Hyp-COL7A1 ProteinQ02388 (Uniprot-TrEMBL)
3x4Hyp-3Hyp-GalHyl-COL7A1 ProteinQ02388 (Uniprot-TrEMBL)
3x4Hyp-3Hyp-GlcGalHyl-COL7A1 ProteinQ02388 (Uniprot-TrEMBL)
3x4Hyp-5Hyl-COL7A1 ProteinQ02388 (Uniprot-TrEMBL)
3x4Hyp-COL7A1 ProteinQ02388 (Uniprot-TrEMBL)
3x4Hyp-GalHyl-COL7A1 ProteinQ02388 (Uniprot-TrEMBL)
3x4Hyp-GlcGalHyl-COL7A1 ProteinQ02388 (Uniprot-TrEMBL)
5Hyl-COL7A1 ProteinQ02388 (Uniprot-TrEMBL)
ADPMetaboliteCHEBI:456216 (ChEBI)
ANKRD28 ProteinO15084 (Uniprot-TrEMBL)
AREG precursor ProteinP15514 (Uniprot-TrEMBL)
ATPMetaboliteCHEBI:30616 (ChEBI)
BET1 ProteinO15155 (Uniprot-TrEMBL)
BET1:GOSR2:STX5:SCFD1ComplexR-HSA-5694305 (Reactome)
BET1ProteinO15155 (Uniprot-TrEMBL)
CNIH1 ProteinO95406 (Uniprot-TrEMBL)
CNIH2 ProteinQ6PI25 (Uniprot-TrEMBL)
CNIH3 ProteinQ8TBE1 (Uniprot-TrEMBL)
COL7A1 ProteinQ02388 (Uniprot-TrEMBL)
COPII

cargo

receptors:SAR1B:GTP:SEC23:SEC24
ComplexR-HSA-5694523 (Reactome)
COPII cargo:receptors:SAR1B:GTP:SEC23:SEC24:SEC16A:SEC16B:TFG hexamer:SEC13:SEC31:SEC23IP:v-SNARESComplexR-HSA-5694337 (Reactome)
COPII cargo:receptors:SAR1B:GTP:SEC23:SEC24:SEC16A:SEC16B:TFG hexamerComplexR-HSA-5694339 (Reactome)
COPII cargo:receptors:SEC23:SEC24:SEC13:SEC31:SEC23IP:v-SNAREs:TRAPPCII:RAB1:GDPComplexR-HSA-5694334 (Reactome)
COPII cargo:receptors:SEC23:SEC24:SEC13:SEC31:SEC23IP:v-SNAREs:TRAPPCII:RAB1:GTP:USO1 homodimer:GOLGA2:GORASP1ComplexR-HSA-5694332 (Reactome)
COPII cargo:receptors:SEC23:SEC24:SEC13:SEC31:SEC23IP:v-SNAREs:TRAPPCII:RAB1:GTPComplexR-HSA-5694330 (Reactome)
COPII cargo:receptors:SEC23:SEC24:SEC13:SEC31:SEC23IP:v-SNAREsComplexR-HSA-5694329 (Reactome)
COPII cargo:receptors:v:SNAREs:GOLGA2:GORASP1:USO1 homodimerComplexR-HSA-5694326 (Reactome)
COPII cargo:receptorsComplexR-HSA-5694244 (Reactome)
COPII cargo:receptorsComplexR-HSA-5694253 (Reactome)
CSNK1DProteinP48730 (Uniprot-TrEMBL)
Cargo concentration in the ERPathwayR-HSA-5694530 (Reactome) Computational analysis suggests that ~25% of the proteome may be exported from the ER in human cells (Kanapin et al, 2003). These cargo need to be recognized and concentrated into COPII vesicles, which range in size from 60-90 nm, and which move cargo from the ER to the ERGIC in mammalian cells (reviewed in Lord et al, 2013; Szul and Sztul, 2011). Recognition of transmembrane cargo is mediated by interaction with one of the 4 isoforms of SEC24, a component of the inner COPII coat (Miller et al, 2002; Miller et al, 2003; Mossessova et al, 2003; Mancias and Goldberg, 2008). Soluble cargo in the ER lumen is concentrated into COPII vesicles through interaction with a receptor of the ERGIC-53 family, the p24 family or the ERV family. Each of these families of transmembrane receptors interact with cargo through their lumenal domains and with components of the COPII coat with their cytoplasmic domains and are packaged into the COPII vesicle along with the cargo. The receptors are subsequently recycled to the ER in COPI vesicles through retrograde traffic (reviewed in Dancourt and Barlowe, 2010). Packaging of large cargo such as fibrillar collagen depends on the transmembrane accessory factors MIA3 (also known as TANGO1) and CTAGE5. Like the ERGIC, p24 and ERV cargo receptors, MIA3 and MIA2 (also known as CTAGE5) interact both with the collagen cargo and with components of the COPII coat. Unlike the other cargo receptors, however, MIA3 and MIA2 are not loaded into the vesicle but remain in the ER membrane (reviewed in Malhotra and Erlmann, 2011; Malhotra et al, 2015).
ER-to-ERGIC v-SNARESComplexR-HSA-5694306 (Reactome)
ER-to-ERGIC v-SNARESComplexR-HSA-5694335 (Reactome)
Factor V precursor ProteinP12259 (Uniprot-TrEMBL)
Factor VIII precursor ProteinP00451 (Uniprot-TrEMBL)
GDP MetaboliteCHEBI:17552 (ChEBI)
GDPMetaboliteCHEBI:17552 (ChEBI)
GOLGA2 ProteinQ08379 (Uniprot-TrEMBL)
GOLGA2:GORASP1ComplexR-HSA-5694327 (Reactome)
GORASP1 ProteinQ9BQQ3 (Uniprot-TrEMBL)
GOSR2 ProteinO14653 (Uniprot-TrEMBL)
GOSR2ProteinO14653 (Uniprot-TrEMBL)
GPI-CD59 ProteinP13987 (Uniprot-TrEMBL)
GPI-FOLR1 ProteinP15328 (Uniprot-TrEMBL)
GRIA1 ProteinP42261 (Uniprot-TrEMBL)
GTP MetaboliteCHEBI:15996 (ChEBI)
GTPMetaboliteCHEBI:15996 (ChEBI)
GalHyl-COL7A1 ProteinQ02388 (Uniprot-TrEMBL)
GlcGalHyl-COL7A1 ProteinQ02388 (Uniprot-TrEMBL)
Glycoproteins with Man8 N-glycans R-HSA-5694207 (Reactome)
Glycoproteins with Man8 N-glycans R-HSA-5694216 (Reactome)
Glycoproteins with Man8 N-glycans R-HSA-5694224 (Reactome)
H2OMetaboliteCHEBI:15377 (ChEBI)
LMAN1 ProteinP49257 (Uniprot-TrEMBL)
LMAN1L ProteinQ9HAT1 (Uniprot-TrEMBL)
LMAN2 ProteinQ12907 (Uniprot-TrEMBL)
LMAN2L ProteinQ9H0V9 (Uniprot-TrEMBL)
MCFD2 ProteinQ8NI22 (Uniprot-TrEMBL)
NAPA ProteinP54920 (Uniprot-TrEMBL)
NAPB ProteinQ9H115 (Uniprot-TrEMBL)
NAPG ProteinQ99747 (Uniprot-TrEMBL)
NSF ProteinP46459 (Uniprot-TrEMBL)
NSF hexamerComplexR-HSA-2193131 (Reactome)
PP6ComplexR-HSA-5694294 (Reactome)
PPP6C ProteinO00743 (Uniprot-TrEMBL)
PPP6R1 ProteinQ9UPN7 (Uniprot-TrEMBL)
PPP6R3 ProteinQ5H9R7 (Uniprot-TrEMBL)
PREBProteinQ9HCU5 (Uniprot-TrEMBL)
PalmC-YKT6 ProteinO15498 (Uniprot-TrEMBL)
PiMetaboliteCHEBI:43474 (ChEBI)
RAB1:GDPComplexR-HSA-5694296 (Reactome)
RAB1:GTP:TBC1D20ComplexR-HSA-6814832 (Reactome)
RAB1:GTPComplexR-HSA-6807799 (Reactome)
RAB1A ProteinP62820 (Uniprot-TrEMBL)
RAB1B ProteinQ9H0U4 (Uniprot-TrEMBL)
SAR1B ProteinQ9Y6B6 (Uniprot-TrEMBL)
SAR1B:GDPComplexR-HSA-203989 (Reactome)
SAR1B:GTPComplexR-HSA-204003 (Reactome)
SAR1BProteinQ9Y6B6 (Uniprot-TrEMBL)
SCFD1 ProteinQ8WVM8 (Uniprot-TrEMBL)
SCFD1ProteinQ8WVM8 (Uniprot-TrEMBL)
SEC13 ProteinP55735 (Uniprot-TrEMBL)
SEC16A ProteinO15027 (Uniprot-TrEMBL)
SEC16A:SEC16BComplexR-HSA-5694307 (Reactome)
SEC16B ProteinQ96JE7 (Uniprot-TrEMBL)
SEC22A ProteinQ96IW7 (Uniprot-TrEMBL)
SEC22B ProteinO75396 (Uniprot-TrEMBL)
SEC22C ProteinQ9BRL7 (Uniprot-TrEMBL)
SEC23:SEC24ComplexR-HSA-203975 (Reactome)
SEC23A ProteinQ15436 (Uniprot-TrEMBL)
SEC23IP ProteinQ9Y6Y8 (Uniprot-TrEMBL)
SEC24A ProteinO95486 (Uniprot-TrEMBL)
SEC24B ProteinO95487 (Uniprot-TrEMBL)
SEC24C ProteinP53992 (Uniprot-TrEMBL)
SEC24D ProteinO94855 (Uniprot-TrEMBL)
SEC24ComplexR-HSA-203991 (Reactome)
SEC31A ProteinO94979 (Uniprot-TrEMBL)
SEC31A:SEC13:SEC23IPComplexR-HSA-5694316 (Reactome)
SNAPsComplexR-HSA-5694313 (Reactome)
STX17 ProteinP56962 (Uniprot-TrEMBL)
STX5 ProteinQ13190 (Uniprot-TrEMBL)
STX5,17ComplexR-HSA-6807784 (Reactome)
TBC1D20 ProteinQ96BZ9 (Uniprot-TrEMBL)
TBC1D20ProteinQ96BZ9 (Uniprot-TrEMBL)
TFG ProteinQ92734 (Uniprot-TrEMBL)
TFG hexamerComplexR-HSA-5694310 (Reactome)
TGFA precursor ProteinP01135 (Uniprot-TrEMBL)
TMED10 ProteinP49755 (Uniprot-TrEMBL)
TMED2 ProteinQ15363 (Uniprot-TrEMBL)
TRAPPC1 ProteinQ9Y5R8 (Uniprot-TrEMBL)
TRAPPC10 ProteinP48553 (Uniprot-TrEMBL)
TRAPPC2 ProteinP0DI81 (Uniprot-TrEMBL)
TRAPPC2L ProteinQ9UL33 (Uniprot-TrEMBL)
TRAPPC3 ProteinO43617 (Uniprot-TrEMBL)
TRAPPC4 ProteinQ9Y296 (Uniprot-TrEMBL)
TRAPPC5 ProteinQ8IUR0 (Uniprot-TrEMBL)
TRAPPC6A ProteinO75865 (Uniprot-TrEMBL)
TRAPPC6B ProteinQ86SZ2 (Uniprot-TrEMBL)
TRAPPC9 ProteinQ96Q05 (Uniprot-TrEMBL)
TRAPPCIIComplexR-HSA-5694315 (Reactome)
USO1 ProteinO60763 (Uniprot-TrEMBL)
USO1 homodimerComplexR-HSA-5694302 (Reactome)
cis-SNARE:NSF hexamer:3xSNAPComplexR-HSA-5694312 (Reactome)
cis-SNAREComplexR-HSA-5694303 (Reactome)
nascent procollagen VII vesicle R-ALL-5694171 (Reactome)
p-S742,T747 SEC23AProteinQ15436 (Uniprot-TrEMBL)
p-SEC24A ProteinO95486 (Uniprot-TrEMBL)
p-SEC24B ProteinO95487 (Uniprot-TrEMBL)
p-SEC24C ProteinP53992 (Uniprot-TrEMBL)
p-SEC24D ProteinO94855 (Uniprot-TrEMBL)
p-SEC24ComplexR-HSA-5694187 (Reactome)

Annotated Interactions

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SourceTargetTypeDatabase referenceComment
ADPArrowR-HSA-5694441 (Reactome)
ATPR-HSA-5694425 (Reactome)
ATPR-HSA-5694441 (Reactome)
BET1:GOSR2:STX5:SCFD1R-HSA-5694446 (Reactome)
BET1ArrowR-HSA-5694425 (Reactome)
COPII

cargo

receptors:SAR1B:GTP:SEC23:SEC24
ArrowR-HSA-5694522 (Reactome)
COPII

cargo

receptors:SAR1B:GTP:SEC23:SEC24
R-HSA-5694417 (Reactome)
COPII

cargo

receptors:SAR1B:GTP:SEC23:SEC24
R-HSA-5694527 (Reactome)
COPII

cargo

receptors:SAR1B:GTP:SEC23:SEC24
mim-catalysisR-HSA-5694527 (Reactome)
COPII cargo:receptors:SAR1B:GTP:SEC23:SEC24:SEC16A:SEC16B:TFG hexamer:SEC13:SEC31:SEC23IP:v-SNARESArrowR-HSA-204008 (Reactome)
COPII cargo:receptors:SAR1B:GTP:SEC23:SEC24:SEC16A:SEC16B:TFG hexamer:SEC13:SEC31:SEC23IP:v-SNARESR-HSA-203973 (Reactome)
COPII cargo:receptors:SAR1B:GTP:SEC23:SEC24:SEC16A:SEC16B:TFG hexamer:SEC13:SEC31:SEC23IP:v-SNARESmim-catalysisR-HSA-203973 (Reactome)
COPII cargo:receptors:SAR1B:GTP:SEC23:SEC24:SEC16A:SEC16B:TFG hexamerArrowR-HSA-5694417 (Reactome)
COPII cargo:receptors:SAR1B:GTP:SEC23:SEC24:SEC16A:SEC16B:TFG hexamerR-HSA-204008 (Reactome)
COPII cargo:receptors:SEC23:SEC24:SEC13:SEC31:SEC23IP:v-SNAREs:TRAPPCII:RAB1:GDPArrowR-HSA-5694439 (Reactome)
COPII cargo:receptors:SEC23:SEC24:SEC13:SEC31:SEC23IP:v-SNAREs:TRAPPCII:RAB1:GDPR-HSA-5694409 (Reactome)
COPII cargo:receptors:SEC23:SEC24:SEC13:SEC31:SEC23IP:v-SNAREs:TRAPPCII:RAB1:GDPmim-catalysisR-HSA-5694409 (Reactome)
COPII cargo:receptors:SEC23:SEC24:SEC13:SEC31:SEC23IP:v-SNAREs:TRAPPCII:RAB1:GTP:USO1 homodimer:GOLGA2:GORASP1ArrowR-HSA-5694418 (Reactome)
COPII cargo:receptors:SEC23:SEC24:SEC13:SEC31:SEC23IP:v-SNAREs:TRAPPCII:RAB1:GTP:USO1 homodimer:GOLGA2:GORASP1R-HSA-5694441 (Reactome)
COPII cargo:receptors:SEC23:SEC24:SEC13:SEC31:SEC23IP:v-SNAREs:TRAPPCII:RAB1:GTPArrowR-HSA-5694409 (Reactome)
COPII cargo:receptors:SEC23:SEC24:SEC13:SEC31:SEC23IP:v-SNAREs:TRAPPCII:RAB1:GTPR-HSA-5694418 (Reactome)
COPII cargo:receptors:SEC23:SEC24:SEC13:SEC31:SEC23IP:v-SNAREsArrowR-HSA-203973 (Reactome)
COPII cargo:receptors:SEC23:SEC24:SEC13:SEC31:SEC23IP:v-SNAREsR-HSA-5694439 (Reactome)
COPII cargo:receptors:v:SNAREs:GOLGA2:GORASP1:USO1 homodimerArrowR-HSA-5694441 (Reactome)
COPII cargo:receptors:v:SNAREs:GOLGA2:GORASP1:USO1 homodimerR-HSA-5694446 (Reactome)
COPII cargo:receptorsArrowR-HSA-5694446 (Reactome)
COPII cargo:receptorsArrowR-HSA-5694527 (Reactome)
COPII cargo:receptorsR-HSA-5694522 (Reactome)
CSNK1Dmim-catalysisR-HSA-5694441 (Reactome)
ER-to-ERGIC v-SNARESArrowR-HSA-5694425 (Reactome)
ER-to-ERGIC v-SNARESR-HSA-204008 (Reactome)
GDPArrowR-HSA-203977 (Reactome)
GDPArrowR-HSA-5694409 (Reactome)
GOLGA2:GORASP1ArrowR-HSA-5694446 (Reactome)
GOLGA2:GORASP1R-HSA-5694418 (Reactome)
GOSR2ArrowR-HSA-5694425 (Reactome)
GTPR-HSA-203977 (Reactome)
GTPR-HSA-5694409 (Reactome)
H2OR-HSA-5694421 (Reactome)
NSF hexamerArrowR-HSA-5694425 (Reactome)
NSF hexamerR-HSA-5694423 (Reactome)
PP6mim-catalysisR-HSA-5694421 (Reactome)
PREBmim-catalysisR-HSA-203977 (Reactome)
PiArrowR-HSA-203973 (Reactome)
PiArrowR-HSA-5694421 (Reactome)
PiArrowR-HSA-5694425 (Reactome)
PiArrowR-HSA-5694527 (Reactome)
R-HSA-203973 (Reactome) Once loaded the vesicles become fully sculpted, pinch off from the ER and bud into the cytosol. Budding depends on SAR1:GTPase activity and likely releases the SEC16 complex. SAR1:GTPase activity may result in partial uncoating of the emerging vesicle, allowing SEC23 to be exposed for subsequent TRAPPCII binding.
R-HSA-203977 (Reactome) SAR1-GDP is recruited to the ER membrane by the transmembrane GEF (Guanine nucleotide exchange factor) PREB (also known as SEC12), where it is converted to SAR1-GTP. PREB itself is recruited to ER exit sites through interaction with MIA2 (also known as CTAGE5).
R-HSA-204008 (Reactome) The outer coat proteins SEC13 and SEC31A are thought to exist in a cytosolic heterohexamer with SEC23IP and are recruited to the ER through interaction with pre-bound SEC23-SEC24 complexes (Stephens et al, 2000; Hammond and Glick, 2000; Ong et al, 2010; reviewed in Szul and Sztul, 2011). v-SNAREs such as the SEC22 proteins are also incorporated into the emerging vesicle through interactions with components of the COPII coat (Xu et al, 2000; Mancias and Goldberg, 2008; Gordon et al, 2010; reviewed in Szul and Sztul, 2011; Lord et al, 2013).
R-HSA-5694409 (Reactome) The TRAPPC complex acts as a guanine-nucleotide exchange factor for RAB1, activating it (Yamasaki et al, 2009; reviewed in Brunet and Sacher, 2014).
R-HSA-5694417 (Reactome) The multimeric SEC16 complex marks sites of ER exit (ERES) and helps to localize nascent COPII coat complexes through interaction with SEC23 and SAR1 (Battacharyya et al, 2007; Watson et al, 2006; Hughes et al, 2009; Yorimitsu and Sato, 2012; reviewed in Sprangers and Rabouille, 2015). SEC16 may help to prevent premature dissociation of the COPII coats after activation of SEC13 GTPase (Supek et al, 2002; Kung et al, 2012). SEC16 functions with hexameric TFG1, which is recruited to the ERES through direct interaction with SEC16 and is required for cargo traffic out of the ER and for organization of the ER-to-ERGIC boundary (Witte et al, 2001; Beetz et al, 2012; Johnson et al, 2015).
R-HSA-5694418 (Reactome) Protein protein interactions involving activated RAB1:GTP help dock the ER-derived vesicle on the cis-Golgi membrane (reviewed in Lord et al, 2013) . Independently, RAB:GTP interacts with both the USO1 homodimer (a long coiled coil tethering factor also known as p115) and the GOLGA2 component of the GOLGA2:GORASP1 complex on the cis-Golgi membrane (Allan et al, 2000; Moyer et al, 2001; Weide et al, 2001). USO1 also contacts GOLGA2 directly (Nakamura et al, 1997; Seeman et al, 2000). t-SNARES such as STX5, GOSR1and GOSR2 also participate in this complex on the cis-ERGIC membrane (Brandon et al, 2006; Shorter et al, 2002; reviewed in Brandizzi and Barlowe, 2013).
R-HSA-5694421 (Reactome) PP6 dephosphorylates released coat proteins including SEC24, SEC31 and SEC23, allowing them to recycle for further rounds of vesicle budding from the ER (Lord et al, 2011; Bhandari et al, 2013).
R-HSA-5694423 (Reactome) After membrane fusion, the cis-SNARE complex is dissociated in an ATP-dependent fashion by the AAA protein NSF in conjunction with SNAP proteins (Mayer et al, 1996; Sollner et al, 1993; reviewed in Jahn and Scheller, 2006; Sudhof and Rothman, 2009).
R-HSA-5694425 (Reactome) NSF-dependent hydrolysis of ATP is required to disassociate the cis-SNARE complex, releasing the SNAREs for further rounds of membrane fusion (Mayer et al, 1996; Muller et al, 1999; Muller et al, 2002; Otto et al, 1997; Whiteheart et al, 2004; Yu et al, 1999; Zhao et al, 2012; Shah et al, 2015; reviewed in Sudhof and Rothman, 2009).
R-HSA-5694439 (Reactome) TRAPPC is a multi-subunit tethering complex that facilitates ER-to-Golgi traffic (reviewed in Barrowman et al, 2010; Brunet and Sacher, 2014). TRAPPC is a guanine-nucleotide exchange factor for RAB1 and is recruited to ER-derived vesicles by virtue of an interaction between the TRAPPC component TRAPPC3 and the coat protein SEC23 (Cai et al, 2007; Lord et al, 2011).
R-HSA-5694441 (Reactome) Coat release at the ERGIC membrane may be stimulated by CSNK1D-dependent phosphorylation of SEC23 and SEC24 (Lord et al, 2011).
R-HSA-5694446 (Reactome) After displacement of the COPII coat, a tetrameric SNAREpin forms between the v-SNARE and the three t-SNARE proteins (Hay et al, 1997; Hay et al, 1998; Hui et al, 1997; Bentley et al, 2006; reviewed in Hong and Lev 2014). This interaction is promoted by the tethering factor USO1 and by the STX5-interacting protein SCFD1 (Wang et al, 2014; Dascher and Balch, 1996; Cao and Barlowe 2000; Flanagan and Barlowe, 2006; reviewed in Lord et al, 2013). The zippering of the SNAREpin provides the mechanical force that drives membrane fusion, releasing cargo into the acceptor compartment (reviewed in Sudhof and Rothman, 2009).
R-HSA-5694522 (Reactome) SAR1:GTP recruits the cytoplasmic SEC23:SEC24 complex. SEC24, and to a lesser extent SEC23, also mediate interaction with COPII cargo, concentrating it into the emerging vesicle. Transmembrane cargo may interact directly with the inner coat proteins, often in an isoform specific manner; alternately, some transmembrane proteins and all soluble cargo interact first with a cargo receptor of the p24, LMAN or ERV families.
R-HSA-5694527 (Reactome) Sar1p-GTP hydrolysis is increased 15-30-fold by Sec23p. Sar1p-GDP is released as a result of this hydrolysis and used in further vesicle sculpting cycles. Sar1p-GTP hydrolysis occurs at two critical points during the cycle, first (as represented here) as a proofreading step, insuring that the cargo is loaded. Later in the cycle Sar1p-GTP hydrolysis triggers the uncoating of the budded vesicle.
R-HSA-6814831 (Reactome) TBC1D20 was identified as a GTPase activating protein for RAB1 that stimulates basal GTP hydrolysis by more than 5 orders of magnitude (Haas et al, 2007; Fuchs et al, 2007).
R-HSA-6814833 (Reactome) TBC1D20 was identified as a RAB1-specific GTPase activating protein (GAP) that stimulates RAB1-mediated GTP hydrolysis and plays roles in ER-to-Golgi trafficking. TBC1D20 is the only GAP that has been identified to block delivery of secretory cargo from the ER to the cell surface (Haas et al, 2007).
RAB1:GDPArrowR-HSA-6814833 (Reactome)
RAB1:GDPR-HSA-5694439 (Reactome)
RAB1:GTP:TBC1D20ArrowR-HSA-6814831 (Reactome)
RAB1:GTP:TBC1D20R-HSA-6814833 (Reactome)
RAB1:GTP:TBC1D20mim-catalysisR-HSA-6814833 (Reactome)
RAB1:GTPArrowR-HSA-5694441 (Reactome)
RAB1:GTPR-HSA-6814831 (Reactome)
SAR1B:GDPArrowR-HSA-5694527 (Reactome)
SAR1B:GDPR-HSA-203977 (Reactome)
SAR1B:GTPArrowR-HSA-203977 (Reactome)
SAR1B:GTPR-HSA-5694522 (Reactome)
SAR1BArrowR-HSA-203973 (Reactome)
SCFD1ArrowR-HSA-5694425 (Reactome)
SEC16A:SEC16BArrowR-HSA-203973 (Reactome)
SEC16A:SEC16BR-HSA-5694417 (Reactome)
SEC23:SEC24ArrowR-HSA-5694527 (Reactome)
SEC23:SEC24R-HSA-5694522 (Reactome)
SEC24ArrowR-HSA-5694421 (Reactome)
SEC31A:SEC13:SEC23IPArrowR-HSA-5694441 (Reactome)
SEC31A:SEC13:SEC23IPR-HSA-204008 (Reactome)
SNAPsArrowR-HSA-5694425 (Reactome)
SNAPsR-HSA-5694423 (Reactome)
STX5,17ArrowR-HSA-5694425 (Reactome)
TBC1D20ArrowR-HSA-6814833 (Reactome)
TBC1D20R-HSA-6814831 (Reactome)
TFG hexamerArrowR-HSA-203973 (Reactome)
TFG hexamerR-HSA-5694417 (Reactome)
TRAPPCIIArrowR-HSA-5694441 (Reactome)
TRAPPCIIR-HSA-5694439 (Reactome)
USO1 homodimerArrowR-HSA-5694446 (Reactome)
USO1 homodimerR-HSA-5694418 (Reactome)
cis-SNARE:NSF hexamer:3xSNAPArrowR-HSA-5694423 (Reactome)
cis-SNARE:NSF hexamer:3xSNAPR-HSA-5694425 (Reactome)
cis-SNARE:NSF hexamer:3xSNAPmim-catalysisR-HSA-5694425 (Reactome)
cis-SNAREArrowR-HSA-5694446 (Reactome)
cis-SNARER-HSA-5694423 (Reactome)
p-S742,T747 SEC23AArrowR-HSA-5694441 (Reactome)
p-SEC24ArrowR-HSA-5694441 (Reactome)
p-SEC24R-HSA-5694421 (Reactome)
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