Transcriptional regulation of testis differentiation (Homo sapiens)

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1-4, 6-8, 10...2, 94, 102, 161, 6, 13, 151, 13, 154164, 5, 102cytosolnucleoplasmendoplasmic reticulum membraneSOX9 DHH gene GATA4SOX9:GATA4:DMRT1geneDMRT1 SOX9 FGF9DMRT1:SOX9 geneDMRT1 gene SRY geneFGF9 geneDMRT1 geneGATA4 SOX9 gene NR5A1PTGDSZFPM2GATA4 SOX9 gene DMRT1 SOX9 gene SOX9 NR5A1 NR5A1 PTGDS gene WT1 SOX9:NR5A1:SOX9 geneWT1:NR5A1:GATA4:ZFPM2:SRY geneSOX9:NR5A1:GATA4:AMHgeneGATA4AMH geneDMRT1:WNT4 geneSRYWNT4 geneSOX9:PTGDS geneSRY AMHSOX9 GATA4NR5A1 DMRT1 ZFPM2 SOX9 geneDMRT1:FOXL2 geneDMRT1SRY gene SRY:NR5A1:SOX9 geneWNT4 gene SOX9:DHH geneNR5A1FOXL2 geneFGF9 gene PTGDS geneWT1SOX9 DHH(33-?)SOX9:FGF9 geneDHH geneGATA4 PGD2SOX9NR5A1 SOX9 FOXL2 gene AMH gene 16


Description

In humans, primordial germ cells (PGCs) are specified about 2 weeks after fertilization, a time before gastrulation (reviewed in Svingen and Koopman 2013, Mäkelä et al. 2019). PGCs are initially located extraembryonically and then migrate to colonize the gonadal ridges (genital ridges) of the embryo during the fifth week after fertilization. At this time, either ovaries and testes can originate from the gonadal ridges. That is, the cells of the gonadal ridges are initially bipotential and remain bipotential until about 42 days after conception, when transient expression of the SRY gene located on the Y chromosome in male embryos is initiated in some somatic cells of the gonadal primordium (reviewed in Sekido and Lovell-Badge 2013, Barrionuevo et al. 2013, Svingen et al. 2013, Mäkelä et al. 2019).
The transcription factors WT1, GATA4, ZFPM2 (FOG2), and the nuclear receptor NR5A1 (SF1) activate transcription of SRY (Shimamura et al. 1997, Hossain and Saunders 2001, De Santa Barbara et al. 2001, Miyamoto et al. 2008, and inferred from mouse homologs). SRY and NR5A1 then activate transcription of SOX9, one of the master regulators of testis development and maintenance (Knower et al. 2011, Croft et al. 2018, inferred from mouse homologs, reviewed in Gonen and Lovell-Badge 2019). Regulation of genes by SRY and then, when expression of SRY decreases, by SOX9 causes the specification of Sertoli cells that further organize formation of the testis by encasing the primordial germ cells in protocords, which then form fully developed testis cords.
SOX9 directly activates its own promoter to maintain SOX9 expression through development and into adulthood (Croft et al. 2018, and inferred from mouse homologs). SOX9 and GATA4 directly activate DMRT1 (inferred from mouse homologs), which maintains testis specification by maintaining expression of SOX9 and other testis-related genes. DMRT1 also acts to suppress ovarian specification by binding and repressing FOXL2 and WNT4 genes (inferred from mouse homologs). SOX9 directly activates FGF9 (inferred from mouse homologs), which acts via FGFR2 to maintain SOX9 expression, and PTGDS (inferred from mouse homologs), which converts Prostaglandin H2 to Prostaglandin D2, a critical hormone-like lipid that recruits supporting cells to Sertoli cells and acts indirectly to maintain SOX9 expression. SOX9, NR5A1, and GATA4 directly activate AMH (De Santa Barbara et al. 1998, and inferred from mouse homologs), an extracellular signaling molecule which causes regression of the Muellerian duct of the female reproductive system. SOX9 also directly activates many other genes, including DHH (Rahmoun et al. 2017, and inferred from mouse homologs), an intercellular signaling molecule required for testis formation. View original pathway at Reactome.

Comments

Reactome-Converter 
Pathway is converted from Reactome ID: 9690406
Reactome-version 
Reactome version: 75
Reactome Author 
Reactome Author: May, Bruce

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Bibliography

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  1. de Santa Barbara P, Méjean C, Moniot B, Malclès MH, Berta P, Boizet-Bonhoure B.; ''Steroidogenic factor-1 contributes to the cyclic-adenosine monophosphate down-regulation of human SRY gene expression.''; PubMed Europe PMC Scholia
  2. Rahmoun M, Lavery R, Laurent-Chaballier S, Bellora N, Philip GK, Rossitto M, Symon A, Pailhoux E, Cammas F, Chung J, Bagheri-Fam S, Murphy M, Bardwell V, Zarkower D, Boizet-Bonhoure B, Clair P, Harley VR, Poulat F.; ''In mammalian foetal testes, SOX9 regulates expression of its target genes by binding to genomic regions with conserved signatures.''; PubMed Europe PMC Scholia
  3. Sekido R, Lovell-Badge R.; ''Genetic control of testis development.''; PubMed Europe PMC Scholia
  4. Croft B, Ohnesorg T, Hewitt J, Bowles J, Quinn A, Tan J, Corbin V, Pelosi E, van den Bergen J, Sreenivasan R, Knarston I, Robevska G, Vu DC, Hutson J, Harley V, Ayers K, Koopman P, Sinclair A.; ''Human sex reversal is caused by duplication or deletion of core enhancers upstream of SOX9.''; PubMed Europe PMC Scholia
  5. Malki S, Nef S, Notarnicola C, Thevenet L, Gasca S, Méjean C, Berta P, Poulat F, Boizet-Bonhoure B.; ''Prostaglandin D2 induces nuclear import of the sex-determining factor SOX9 via its cAMP-PKA phosphorylation.''; PubMed Europe PMC Scholia
  6. Shimamura R, Fraizer GC, Trapman J, Lau YfC, Saunders GF.; ''The Wilms' tumor gene WT1 can regulate genes involved in sex determination and differentiation: SRY, Müllerian-inhibiting substance, and the androgen receptor.''; PubMed Europe PMC Scholia
  7. Kanai Y, Hiramatsu R, Matoba S, Kidokoro T.; ''From SRY to SOX9: mammalian testis differentiation.''; PubMed Europe PMC Scholia
  8. Mäkelä JA, Koskenniemi JJ, Virtanen HE, Toppari J.; ''Testis Development.''; PubMed Europe PMC Scholia
  9. Jørgensen A, Nielsen JE, Blomberg Jensen M, Græm N, Rajpert-De Meyts E.; ''Analysis of meiosis regulators in human gonads: a sexually dimorphic spatio-temporal expression pattern suggests involvement of DMRT1 in meiotic entry.''; PubMed Europe PMC Scholia
  10. Knower KC, Kelly S, Ludbrook LM, Bagheri-Fam S, Sim H, Bernard P, Sekido R, Lovell-Badge R, Harley VR.; ''Failure of SOX9 regulation in 46XY disorders of sex development with SRY, SOX9 and SF1 mutations.''; PubMed Europe PMC Scholia
  11. Svingen T, Koopman P.; ''Building the mammalian testis: origins, differentiation, and assembly of the component cell populations.''; PubMed Europe PMC Scholia
  12. Gonen N, Lovell-Badge R.; ''The regulation of Sox9 expression in the gonad.''; PubMed Europe PMC Scholia
  13. Hossain A, Saunders GF.; ''The human sex-determining gene SRY is a direct target of WT1.''; PubMed Europe PMC Scholia
  14. Barrionuevo F, Scherer G.; ''SOX E genes: SOX9 and SOX8 in mammalian testis development.''; PubMed Europe PMC Scholia
  15. Miyamoto Y, Taniguchi H, Hamel F, Silversides DW, Viger RS.; ''A GATA4/WT1 cooperation regulates transcription of genes required for mammalian sex determination and differentiation.''; PubMed Europe PMC Scholia
  16. De Santa Barbara P, Bonneaud N, Boizet B, Desclozeaux M, Moniot B, Sudbeck P, Scherer G, Poulat F, Berta P.; ''Direct interaction of SRY-related protein SOX9 and steroidogenic factor 1 regulates transcription of the human anti-Müllerian hormone gene.''; PubMed Europe PMC Scholia
  17. Barrionuevo FJ, Burgos M, Scherer G, Jiménez R.; ''Genes promoting and disturbing testis development.''; PubMed Europe PMC Scholia

History

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CompareRevisionActionTimeUserComment
115132view12:22, 27 January 2021DeSlOntology Term : 'transcription factor mediated signaling pathway' added !
115131view12:22, 27 January 2021DeSlOntology Term : 'signaling pathway pertinent to development' added !
115130view12:21, 27 January 2021DeSlOntology Term : 'primordial germ cell' added !
115129view12:19, 27 January 2021DeSlOntology Term : 'regulatory pathway' added !
115100view17:05, 25 January 2021ReactomeTeamNew pathway

External references

DataNodes

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NameTypeDatabase referenceComment
AMH gene ProteinENSG00000104899 (Ensembl)
AMH geneGeneProductENSG00000104899 (Ensembl)
AMHProteinP03971 (Uniprot-TrEMBL)
DHH gene ProteinENSG00000139549 (Ensembl)
DHH geneGeneProductENSG00000139549 (Ensembl)
DHH(33-?)ProteinO43323 (Uniprot-TrEMBL)
DMRT1 ProteinQ9Y5R6 (Uniprot-TrEMBL)
DMRT1 gene ProteinENSG00000137090 (Ensembl)
DMRT1 geneGeneProductENSG00000137090 (Ensembl)
DMRT1:FOXL2 geneComplexR-HSA-9692237 (Reactome)
DMRT1:SOX9 geneComplexR-HSA-9692217 (Reactome)
DMRT1:WNT4 geneComplexR-HSA-9692298 (Reactome)
DMRT1ProteinQ9Y5R6 (Uniprot-TrEMBL)
FGF9 gene ProteinENSG00000102678 (Ensembl)
FGF9 geneGeneProductENSG00000102678 (Ensembl)
FGF9ProteinP31371 (Uniprot-TrEMBL)
FOXL2 gene ProteinENSG00000183770 (Ensembl)
FOXL2 geneGeneProductENSG00000183770 (Ensembl)
GATA4 ProteinP43694 (Uniprot-TrEMBL)
GATA4ProteinP43694 (Uniprot-TrEMBL)
NR5A1 ProteinQ13285 (Uniprot-TrEMBL)
NR5A1ProteinQ13285 (Uniprot-TrEMBL)
PGD2MetaboliteCHEBI:15555 (ChEBI)
PTGDS gene ProteinENSG00000107317 (Ensembl)
PTGDS geneGeneProductENSG00000107317 (Ensembl)
PTGDSProteinP41222 (Uniprot-TrEMBL)
SOX9 ProteinP48436 (Uniprot-TrEMBL)
SOX9 gene ProteinENSG00000125398 (Ensembl)
SOX9 geneGeneProductENSG00000125398 (Ensembl)
SOX9:DHH geneComplexR-HSA-9692116 (Reactome)
SOX9:FGF9 geneComplexR-HSA-9692111 (Reactome)
SOX9:GATA4:DMRT1 geneComplexR-HSA-9690879 (Reactome)
SOX9:NR5A1:GATA4:AMH geneComplexR-HSA-9692117 (Reactome)
SOX9:NR5A1:SOX9 geneComplexR-HSA-9690386 (Reactome)
SOX9:PTGDS geneComplexR-HSA-9692114 (Reactome)
SOX9ProteinP48436 (Uniprot-TrEMBL)
SRY ProteinQ05066 (Uniprot-TrEMBL)
SRY gene ProteinENSG00000184895 (Ensembl)
SRY geneGeneProductENSG00000184895 (Ensembl)
SRY:NR5A1:SOX9 geneComplexR-HSA-9690390 (Reactome)
SRYProteinQ05066 (Uniprot-TrEMBL)
WNT4 gene ProteinENSG00000162552 (Ensembl)
WNT4 geneGeneProductENSG00000162552 (Ensembl)
WT1 ProteinP19544 (Uniprot-TrEMBL)
WT1:NR5A1:GATA4:ZFPM2:SRY geneComplexR-HSA-9692256 (Reactome)
WT1ProteinP19544 (Uniprot-TrEMBL)
ZFPM2 ProteinQ8WW38 (Uniprot-TrEMBL)
ZFPM2ProteinQ8WW38 (Uniprot-TrEMBL)

Annotated Interactions

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SourceTargetTypeDatabase referenceComment
AMH geneR-HSA-9692135 (Reactome)
AMH geneR-HSA-9693009 (Reactome)
AMHArrowR-HSA-9693009 (Reactome)
ArrowR-HSA-9690404 (Reactome)
DHH geneR-HSA-9692146 (Reactome)
DHH geneR-HSA-9692150 (Reactome)
DHH(33-?)ArrowR-HSA-9692146 (Reactome)
DMRT1 geneR-HSA-9690877 (Reactome)
DMRT1 geneR-HSA-9690896 (Reactome)
DMRT1:FOXL2 geneArrowR-HSA-9692236 (Reactome)
DMRT1:SOX9 geneArrowR-HSA-9690404 (Reactome)
DMRT1:SOX9 geneArrowR-HSA-9692228 (Reactome)
DMRT1:WNT4 geneArrowR-HSA-9692297 (Reactome)
DMRT1ArrowR-HSA-9690877 (Reactome)
DMRT1R-HSA-9692228 (Reactome)
DMRT1R-HSA-9692236 (Reactome)
DMRT1R-HSA-9692297 (Reactome)
FGF9 geneR-HSA-9692131 (Reactome)
FGF9 geneR-HSA-9692134 (Reactome)
FGF9ArrowR-HSA-9692134 (Reactome)
FOXL2 geneR-HSA-9692236 (Reactome)
GATA4R-HSA-9690896 (Reactome)
GATA4R-HSA-9692135 (Reactome)
GATA4R-HSA-9692250 (Reactome)
NR5A1R-HSA-9690414 (Reactome)
NR5A1R-HSA-9692135 (Reactome)
NR5A1R-HSA-9692250 (Reactome)
PTGDS geneR-HSA-9692129 (Reactome)
PTGDS geneR-HSA-9692154 (Reactome)
PTGDSArrowR-HSA-9692129 (Reactome)
R-HSA-9690395 (Reactome) SOX9 together with NR5A1 (SF1) binds the TES enhancer and other enhancers upstream of the SOX coding region (Croft et al. 2018 and inferred from mouse homologs) and thereby activates its own expression. As SRY expression decreases during testis differentiation, SOX9 and, later, DMRT1 become responsible for maintaining expression of SOX9.
R-HSA-9690404 (Reactome) Subsequent to SRY expression in the gonadal ridge, the SOX9 gene is transcribed to yield mRNA and the mRNA is translated to yield SOX9 protein (Knower et al. 2011, Croft et al. 2018). SRY and NR5A1 (SF1) bound at the TES enhancer (Knower et al. 2011) and the eALDI enhancer (upstream of the TES enhancer, Croft et al. 2018) of the SOX9 gene initially activate transcription of SOX9 (Knower et al. 2011, Croft et al. 2018, and inferred from mouse homologs). Later, SOX9 and NR5A1 activate the TES enhancer, providing a mechanism for autoregulation (Knower et al. 2011). DMRT1, itself directly activated by SOX9, also directly activates SOX9 (inferred from mouse homologs). FGF9 acting through FGFR2 (inferred from mouse homologs) and Prostaglandin D2 (Malki et al. 2005), the product of PTGDS, activate SOX9 through less well characterized mechanisms.
R-HSA-9690414 (Reactome) SRY and NR5A1 (SF1) bind several sites in the TES enhancer upstream of the SOX9 coding region (Knower et al. 2011) and the eALDI enhancer upstream of TES (Croft et al. 2018, and inferred from mouse homologs). SRY weakly enhances SOX9 expression only when NR5A1 is also bound to the TES enhancer (inferred from mouse homologs). SRY bound to eALDI more strongly activates SOX9 (Croft et al. 2018).
R-HSA-9690877 (Reactome) In the gonadal ridge, the DMRT1 gene is transcribed to yield mRNA and the mRNA is translated to yield DMRT1 protein (Jørgensen et al. 2012, Rahmoun et al. 2017 and inferred from mouse homologs). SOX9 and GATA4 bind the promoter of the DMRT1 gene and activate transcription of DMRT1 (Rahmoun et al. 2017 and inferred from mouse homologs). DMRT1 is initially expressed in Sertoli cells at 8-20 weeks of gestation (Jørgensen et al. 2012). Expression then shifts to spermatogonial cells.
R-HSA-9690896 (Reactome) SOX9 and GATA4 bind a "Sertoli Cell Signature" sequence upstream of the DMRT1 coding region (inferred from mouse homologs).
R-HSA-9692129 (Reactome) In the developing testis, the PTGDS gene is transcribed to yield mRNA and the mRNA is translated to yield PTGDS protein (inferred from mouse homologs). Transcription of PTGDS is directly activated by SOX9 (inferred from mouse homologs).
R-HSA-9692131 (Reactome) SOX9 binds the promoter of the FGF9 gene (inferred from mouse homologs)
R-HSA-9692134 (Reactome) The FGF9 gene is transcribed to yield mRNA and the mRNA is translated to yield FGF9 protein (inferred from mouse homologs). In the developing testis, FGF9 transcription is activated by SOX9 (inferred from mouse homologs).
R-HSA-9692135 (Reactome) SOX9, NR5A1 (SF1), and GATA4 bind the promoter of the AMH gene (De Santa Barbara et al. 1998 and inferred from mouse homologs). SOX9 and NR5A1 interact directly (De Santa Barbara et al. 1998).
R-HSA-9692146 (Reactome) The DHH gene is transcribed to yield mRNA and the mRNA is translated to yield DHH protein (Rahmoun et al. 2017 and inferred from mouse homologs). Transcription of DHH is directly activated by SOX9 (inferred from mouse homologs). DHH is secreted from pre-Sertoli cells (Rahmoun et al. 2017 and inferred from mouse homologs) and acts via the PTCH1 receptor to regulate testis development.
R-HSA-9692150 (Reactome) SOX9 binds the promoter of the DHH gene (inferred from mouse homologs).
R-HSA-9692154 (Reactome) SOX9 binds the promoter of the PTGDS gene (inferred from mouse homologs).
R-HSA-9692228 (Reactome) DMRT1, a direct target of SOX9, binds the promoter of the SOX9 gene (inferred from mouse homologs). DMRT1 and SOX9 are responsible for maintaining expression of SOX9 after SOX9 is initially activated by SRY.
R-HSA-9692236 (Reactome) DMRT1 binds the FOXL2 gene and represses transcription of FOXL2, a promoter of ovary differentiation (inferred from mouse homologs).
R-HSA-9692241 (Reactome) In the gonadal ridge (genital ridge), the SRY gene is transcribed to yield mRNA and the mRNA is translated to yield SRY protein (De Santa Barbara et al. 2001, Hossain end Saunders 2001, Miyamoto et al. 2008, also inferred from mouse homologs). Transcription of SRY is activated by WT1 (Hossain and Saunders 2001, Miyamoto et al. 2008), GATA4:ZFPM2 (also called GATA4:FOG2) (Miyamoto et al. 2008), and NR5A1 (also called SF1) (De Santa Barbara et al. 2001).
R-HSA-9692250 (Reactome) The transcription factors WT1 (Shimamura et al. 1997, Hossain and Saunders 2001, Miyamoto et al. 2008, also inferred from mouse homologs), NR5A1 (also called SF1) (De Santa Barbara et al. 2001), GATA4:ZFPM2 (also called GATA4:FOG2) (Miyamoto et al. 2008, also inferred from mouse homologs) bind the promoter of the SRY gene and activate transcription of SRY. SRY is a mammal-specific gene located on the Y chromosome that is responsible for male sex determination.
R-HSA-9692297 (Reactome) DMRT1 binds the WNT4 gene and represses transcription of WNT4, a promoter of ovary differentiation (inferred from mouse homologs).
R-HSA-9693009 (Reactome) In differentiating Sertoli cells of the testis, the AMH gene is transcribed to yield mRNA and the mRNA is translated to yield AMH protein (De Santa Barbara et al. 1998, Rahmoun et al. 2017, and inferred from mouse homologs). SOX9, NR5A1 (SF1), and GATA4 bind the promoter of the AMH gene and activate transcription (De Santa Barbara et al. 1998, Rahmoun et al. 2017, and inferred from mouse homologs). AMH is secreted and acts via the AMHR receptor to suppress formation of the Mullerian duct.
SOX9 geneR-HSA-9690404 (Reactome)
SOX9 geneR-HSA-9690414 (Reactome)
SOX9 geneR-HSA-9692228 (Reactome)
SOX9:DHH geneArrowR-HSA-9692146 (Reactome)
SOX9:DHH geneArrowR-HSA-9692150 (Reactome)
SOX9:FGF9 geneArrowR-HSA-9692131 (Reactome)
SOX9:FGF9 geneArrowR-HSA-9692134 (Reactome)
SOX9:GATA4:DMRT1 geneArrowR-HSA-9690877 (Reactome)
SOX9:GATA4:DMRT1 geneArrowR-HSA-9690896 (Reactome)
SOX9:NR5A1:GATA4:AMH geneArrowR-HSA-9692135 (Reactome)
SOX9:NR5A1:GATA4:AMH geneArrowR-HSA-9693009 (Reactome)
SOX9:NR5A1:SOX9 geneArrowR-HSA-9690395 (Reactome)
SOX9:NR5A1:SOX9 geneArrowR-HSA-9690404 (Reactome)
SOX9:PTGDS geneArrowR-HSA-9692129 (Reactome)
SOX9:PTGDS geneArrowR-HSA-9692154 (Reactome)
SOX9ArrowR-HSA-9690404 (Reactome)
SOX9R-HSA-9690395 (Reactome)
SOX9R-HSA-9690896 (Reactome)
SOX9R-HSA-9692131 (Reactome)
SOX9R-HSA-9692135 (Reactome)
SOX9R-HSA-9692150 (Reactome)
SOX9R-HSA-9692154 (Reactome)
SRY geneR-HSA-9692241 (Reactome)
SRY geneR-HSA-9692250 (Reactome)
SRY:NR5A1:SOX9 geneArrowR-HSA-9690404 (Reactome)
SRY:NR5A1:SOX9 geneArrowR-HSA-9690414 (Reactome)
SRY:NR5A1:SOX9 geneR-HSA-9690395 (Reactome)
SRYArrowR-HSA-9692241 (Reactome)
SRYR-HSA-9690414 (Reactome)
WNT4 geneR-HSA-9692297 (Reactome)
WT1:NR5A1:GATA4:ZFPM2:SRY geneArrowR-HSA-9692241 (Reactome)
WT1:NR5A1:GATA4:ZFPM2:SRY geneArrowR-HSA-9692250 (Reactome)
WT1R-HSA-9692250 (Reactome)
ZFPM2R-HSA-9692250 (Reactome)
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