Urea cycle and metabolism of amino groups (Rattus norvegicus)
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L-Glutamate-
5-semialdehyde
Guanidinoacetate
L-Ornithine
Fumarate
L-Citrulline
Creatine
CO2
L-Aspartate
creatine-P
Creatinine
N2-Acetyl-L-ornithine
Ala and aspartate metabolism
Pro metabolism
N-Acetyl-L-glutamate
Glutamate metabolism
D-Arg and D-ornithine metabolism
Phosphoguanidinoacetate
Purine metabolism
Nitrogen metabolism
Amino acid metabolism
Citrate cycle (TCA cycle)
Putrescine
N-Acetyl-glutamate
NH3
N-Acetyl-L-glutamate
N-Carbamoylsarcosine
L-Glutamate
Urea-1-carboxylate
Arginine metabolism
Spermidine
Arginine
N-Methylhydantoin
C03406
(S)-1-Pyrroline-5-carboxylate
Pyrimidine metabolism
Formate
Sarcosine
Formaldehyde
Spermine
L-Glutamyl
Carbamoyl-P
L-Proline
Urea
Pycr1
GeneProduct
Pycrl
3.5.2.10
2.7.2.8
3.5.1.16
3.5.3.3
Acy1
1.2.1.46
Srm
Arg2
LOC363469
2.6.1.69
3.5.1.59
Otc
Asl
Cps1
1.2.1.38
Ass
2.7.3.1
Gamt
Pycs
3.5.1.5
Glud1
Ckm
2.6.1.11
Oat
LOC363469
2.3.1.35
3.5.2.14
GeneProduct
Odc1
1.5.99.1
Nags
3.5.1.54
6.3.4.6
3.5.4.21
Pycs
Gatm
Arg1
Ckb
Description
GenMAPP notes: link to original KEGG map in comments is broken, correct link:
http://www.kegg.jp/kegg-bin/show_pathway?rno00220
Comments
GenMAPP notes
Link to original KEGG map:
http://www.genome.ad.jp/dbget-bin/show
pathway?rno00220
GenMAPP remarks
Eddited by Sebastien Burel
Try the New WikiPathways
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Bibliography
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History
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Compare
Revision
Action
Time
User
Comment
109430
view
09:51, 17 March 2020
L Dupuis
Connected line
109408
view
18:05, 16 March 2020
L Dupuis
Fixed interactions
107236
view
14:33, 17 September 2019
MaintBot
ChEBI identifier normalization
93711
view
12:08, 11 August 2017
DeSl
Added 3 IDs for previously not annotated nodes.
93710
view
12:02, 11 August 2017
DeSl
Added more connectivity between nodes.
93709
view
11:56, 11 August 2017
DeSl
Tried to connect all the nodes for this PW; lines were hidden under the nodes :(
93706
view
11:37, 11 August 2017
DeSl
Added IDs for not annotated metabolite nodes, changed appearence of several nodes.
93704
view
10:56, 11 August 2017
DeSl
Modified description
79705
view
08:09, 6 April 2015
Egonw
Replaced a gene name with its Entrez Gene identifier.
79704
view
08:06, 6 April 2015
Egonw
Converted more labels to metabolite DataNode's.
77392
view
11:30, 5 September 2014
Egonw
Added a bunch of ChemSpider identifiers for metabolites with IUPAC names.
77391
view
11:18, 5 September 2014
Egonw
Replace a bunch of Labels for metabolites with Metabolite DataNodes (without IDs).
72184
view
07:32, 27 October 2013
Egonw
Converted a bunch of labels to Metabolite DataNodes, and cleaned up arrows.
72141
view
09:59, 25 October 2013
Mkutmon
added annotation of EC numbers
67800
view
19:42, 26 June 2013
Egonw
Connected some dots.
67739
view
11:57, 26 June 2013
Ddigles
Ontology Term : 'urea cycle pathway' added !
41771
view
02:42, 2 March 2011
MaintBot
Removed redundant pathway information and comments
21003
view
11:30, 14 November 2008
MaintBot
[[Pathway:Rattus norvegicus:Urea cycle and metabolism of amino groups KEGG]] moved to [[Pathway:WP153]]: Moved to stable identifier
8480
view
13:46, 7 January 2008
MaintBot
[[Pathway:Rat:Urea cycle and metabolism of amino groups KEGG]] moved to [[Pathway:Rattus norvegicus:Urea cycle and metabolism of amino groups KEGG]]: Renaming species
7856
view
16:23, 18 December 2007
MaintBot
fixed category names
7415
view
12:42, 4 November 2007
MaintBot
Added categories to GPML
6608
view
22:20, 22 May 2007
L.M.Ferrante
gpml file for [[Rat:Urea_cycle_and_metabolism_of_amino_groups_KEGG]]
External references
DataNodes
View all...
Name
Type
Database reference
Comment
(S)-1-Pyrroline-5-carboxylate
Metabolite
10140206 (Chemspider)
(S)-1-Pyrroline-5-carboxylate
1.2.1.38
GeneProduct
1.2.1.38 (Enzyme Nomenclature)
1.2.1.46
GeneProduct
1.2.1.46 (Enzyme Nomenclature)
1.5.99.1
GeneProduct
1.5.99.1 (Enzyme Nomenclature)
2.3.1.35
GeneProduct
2.3.1.35 (Enzyme Nomenclature)
2.6.1.11
GeneProduct
2.6.1.11 (Enzyme Nomenclature)
2.6.1.69
GeneProduct
2.6.1.69 (Enzyme Nomenclature)
2.7.2.8
GeneProduct
2.7.2.8 (Enzyme Nomenclature)
2.7.3.1
GeneProduct
2.7.3.1 (Enzyme Nomenclature)
3.5.1.16
GeneProduct
3.5.1.16 (Enzyme Nomenclature)
3.5.1.5
GeneProduct
3.5.1.5 (Enzyme Nomenclature)
3.5.1.54
GeneProduct
3.5.1.54 (Enzyme Nomenclature)
3.5.1.59
GeneProduct
3.5.1.59 (Enzyme Nomenclature)
3.5.2.10
GeneProduct
3.5.2.10 (Enzyme Nomenclature)
3.5.2.14
GeneProduct
3.5.2.14 (Enzyme Nomenclature)
3.5.3.3
GeneProduct
3.5.3.3 (Enzyme Nomenclature)
3.5.4.21
GeneProduct
3.5.4.21 (Enzyme Nomenclature)
6.3.4.6
GeneProduct
6.3.4.6 (Enzyme Nomenclature)
Acy1
GeneProduct
300981 (Entrez Gene)
Ala and aspartate metabolism
Pathway
Amino acid metabolism
Pathway
Arg1
GeneProduct
29221 (Entrez Gene)
Arg2
GeneProduct
29215 (Entrez Gene)
Arginine metabolism
Pathway
Arginine
Metabolite
227 (Chemspider)
L-Arginine
Asl
GeneProduct
59085 (Entrez Gene)
Ass
GeneProduct
25698 (Entrez Gene)
C03406
Metabolite
C03406 (KEGG Compound)
N-(L-Arginino)succinate
CO2
Metabolite
280 (PubChem-compound)
CO2
Carbamoyl-P
Metabolite
17672 (ChEBI)
Carbamoyl
Citrate cycle (TCA cycle)
Pathway
Ckb
GeneProduct
24264 (Entrez Gene)
Ckm
GeneProduct
24265 (Entrez Gene)
Cps1
GeneProduct
24956 (Entrez Gene)
Creatine
Metabolite
566 (Chemspider)
Creatine
Creatinine
Metabolite
CHEBI:16737 (ChEBI)
Creatinine
D-Arg and D-ornithine metabolism
Pathway
Formaldehyde
Metabolite
692 (Chemspider)
Formaldehyde
Formate
Metabolite
277 (Chemspider)
Formate
Fumarate
Metabolite
144248 (Chemspider)
Fumarate
Gamt
GeneProduct
25257 (Entrez Gene)
Gatm
GeneProduct
81660 (Entrez Gene)
GeneProduct
GeneProduct
Glud1
GeneProduct
24399 (Entrez Gene)
Glutamate metabolism
Pathway
Guanidinoacetate
Metabolite
10707243 (Chemspider)
Guanidinoacetate
L-Aspartate
Metabolite
3714789 (Chemspider)
L-Aspartate
L-Citrulline
Metabolite
810 (Chemspider)
L-Citrulline
L-Glutamate- 5-semialdehyde
Metabolite
CHEBI:17232 (ChEBI)
L-Glutamate
Metabolite
4302384 (Chemspider)
L-Glutamate
L-Glutamyl
Metabolite
C20949 (KEGG Compound)
L-Glutamyl
L-Ornithine
Metabolite
380 (Chemspider)
L-Ornithine
L-Proline
Metabolite
CHEBI:17203 (ChEBI)
L-Proline
LOC363469
GeneProduct
363469 (Entrez Gene)
N-Acetyl-L-glutamate
Metabolite
10626897 (Chemspider)
N-Acetyl-L-glutamate
N-Acetyl-glutamate
Metabolite
10626897 (Chemspider)
N-Acetyl-L-glutamate
N-Carbamoylsarcosine
Metabolite
388495 (Chemspider)
N-Carbamoylsarcosine
N-Methylhydantoin
Metabolite
62430 (Chemspider)
N-Methylhydantoin
N2-Acetyl-L-ornithine
Metabolite
439232 (PubChem-compound)
N2-Acetyl-L-ornithine
NH3
Metabolite
222 (PubChem-compound)
NH3
Nags
GeneProduct
303563 (Entrez Gene)
LOC303563 or RGD1565783
Nitrogen metabolism
Pathway
Oat
GeneProduct
64313 (Entrez Gene)
Odc1
GeneProduct
24609 (Entrez Gene)
Otc
GeneProduct
25611 (Entrez Gene)
Phosphoguanidinoacetate
Metabolite
19992631 (Chemspider)
Phosphoguanidinoacetate
Pro metabolism
Pathway
Purine metabolism
Pathway
Putrescine
Metabolite
13837702 (Chemspider)
Putrescine
Pycr1
GeneProduct
287877 (Entrez Gene)
Pycrl
GeneProduct
300035 (Entrez Gene)
Pycs
GeneProduct
361755 (Entrez Gene)
Pyrimidine metabolism
Pathway
Sarcosine
Metabolite
1057 (Chemspider)
Sarcosine
Spermidine
Metabolite
1071 (Chemspider)
Spermidine
Spermine
Metabolite
1072 (Chemspider)
Spermine
Srm
GeneProduct
84596 (Entrez Gene)
Urea-1-carboxylate
Metabolite
9543250 (PubChem-compound)
Urea-1-carboxylate
Urea
Metabolite
1143 (Chemspider)
Urea
creatine-P
Metabolite
9548602 (PubChem-compound)
Phosphocreatine
Annotated Interactions
No annotated interactions
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