Urea cycle and metabolism of amino groups (Rattus norvegicus)
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Pyrimidine metabolism
Nitrogen metabolism
N-Acetyl-glutamate
Phosphoguanidinoacetate
L-Ornithine
Sarcosine
Ala and aspartate metabolism
L-Proline
Spermidine
N-Acetyl-L-glutamate
CO2
creatine-P
L-Glutamate
Urea-1-carboxylate
Purine metabolism
Formate
Guanidinoacetate
Amino acid metabolism
L-Glutamyl
Glutamate metabolism
Creatine
C03406
Urea
L-Aspartate
Carbamoyl
L-Citrulline
N-Methylhydantoin
Citrate cycle (TCA cycle)
Formaldehyde
Arginine
Putrescine
Spermine
NH3
N-Carbamoylsarcosine
L-Glutamate-
5-semialdehyde
D-Arg and D-ornithine metabolism
(S)-1-Pyrroline-5-carboxylate
Fumarate
N2-Acetyl-L-ornithine
Creatinine
Pro metabolism
N-Acetyl-L-glutamate
Arginine metabolism
2.6.1.69
3.5.1.54
6.3.4.6
Arg1
LOC363469
3.5.1.5
Gatm
Gamt
2.6.1.11
Asl
Glud1
Arg2
Odc1
Ass
Srm
LOC303563
3.5.2.14
3.5.3.3
Pycs
LOC363469
1.5.99.1
3.5.1.59
2.7.2.8
3.5.1.16
Pycrl
2.7.3.1
3.5.2.10
Oat
Pycr1
Acy1
Pycs
Ckb
Otc
Ckm
2.3.1.35
1.2.1.38
1.2.1.46
3.5.4.21
Cps1
Description
GenMAPP notes: link to original KEGG map in comments is broken, correct link:
http://www.kegg.jp/kegg-bin/show_pathway?rno00220
Comments
GenMAPP notes
Link to original KEGG map:
http://www.genome.ad.jp/dbget-bin/show
pathway?rno00220
GenMAPP remarks
Eddited by Sebastien Burel
Try the New WikiPathways
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Quality Tags
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Bibliography
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History
View all...
Compare
Revision
Action
Time
User
Comment
109430
view
09:51, 17 March 2020
L Dupuis
Connected line
109408
view
18:05, 16 March 2020
L Dupuis
Fixed interactions
107236
view
14:33, 17 September 2019
MaintBot
ChEBI identifier normalization
93711
view
12:08, 11 August 2017
DeSl
Added 3 IDs for previously not annotated nodes.
93710
view
12:02, 11 August 2017
DeSl
Added more connectivity between nodes.
93709
view
11:56, 11 August 2017
DeSl
Tried to connect all the nodes for this PW; lines were hidden under the nodes :(
93706
view
11:37, 11 August 2017
DeSl
Added IDs for not annotated metabolite nodes, changed appearence of several nodes.
93704
view
10:56, 11 August 2017
DeSl
Modified description
79705
view
08:09, 6 April 2015
Egonw
Replaced a gene name with its Entrez Gene identifier.
79704
view
08:06, 6 April 2015
Egonw
Converted more labels to metabolite DataNode's.
77392
view
11:30, 5 September 2014
Egonw
Added a bunch of ChemSpider identifiers for metabolites with IUPAC names.
77391
view
11:18, 5 September 2014
Egonw
Replace a bunch of Labels for metabolites with Metabolite DataNodes (without IDs).
72184
view
07:32, 27 October 2013
Egonw
Converted a bunch of labels to Metabolite DataNodes, and cleaned up arrows.
72141
view
09:59, 25 October 2013
Mkutmon
added annotation of EC numbers
67800
view
19:42, 26 June 2013
Egonw
Connected some dots.
67739
view
11:57, 26 June 2013
Ddigles
Ontology Term : 'urea cycle pathway' added !
41771
view
02:42, 2 March 2011
MaintBot
Removed redundant pathway information and comments
21003
view
11:30, 14 November 2008
MaintBot
[[Pathway:Rattus norvegicus:Urea cycle and metabolism of amino groups KEGG]] moved to [[Pathway:WP153]]: Moved to stable identifier
8480
view
13:46, 7 January 2008
MaintBot
[[Pathway:Rat:Urea cycle and metabolism of amino groups KEGG]] moved to [[Pathway:Rattus norvegicus:Urea cycle and metabolism of amino groups KEGG]]: Renaming species
7856
view
16:23, 18 December 2007
MaintBot
fixed category names
7415
view
12:42, 4 November 2007
MaintBot
Added categories to GPML
6608
view
22:20, 22 May 2007
L.M.Ferrante
gpml file for [[Rat:Urea_cycle_and_metabolism_of_amino_groups_KEGG]]
External references
DataNodes
View all...
Name
Type
Database reference
Comment
(S)-1-Pyrroline-5-carboxylate
Metabolite
10140206 (Chemspider)
(S)-1-Pyrroline-5-carboxylate
1.2.1.38
GeneProduct
1.2.1.38 (Enzyme Nomenclature)
1.2.1.46
GeneProduct
1.2.1.46 (Enzyme Nomenclature)
1.5.99.1
GeneProduct
1.5.99.1 (Enzyme Nomenclature)
2.3.1.35
GeneProduct
2.3.1.35 (Enzyme Nomenclature)
2.6.1.11
GeneProduct
2.6.1.11 (Enzyme Nomenclature)
2.6.1.69
GeneProduct
2.6.1.69 (Enzyme Nomenclature)
2.7.2.8
GeneProduct
2.7.2.8 (Enzyme Nomenclature)
2.7.3.1
GeneProduct
2.7.3.1 (Enzyme Nomenclature)
3.5.1.16
GeneProduct
3.5.1.16 (Enzyme Nomenclature)
3.5.1.5
GeneProduct
3.5.1.5 (Enzyme Nomenclature)
3.5.1.54
GeneProduct
3.5.1.54 (Enzyme Nomenclature)
3.5.1.59
GeneProduct
3.5.1.59 (Enzyme Nomenclature)
3.5.2.10
GeneProduct
3.5.2.10 (Enzyme Nomenclature)
3.5.2.14
GeneProduct
3.5.2.14 (Enzyme Nomenclature)
3.5.3.3
GeneProduct
3.5.3.3 (Enzyme Nomenclature)
3.5.4.21
GeneProduct
3.5.4.21 (Enzyme Nomenclature)
6.3.4.6
GeneProduct
6.3.4.6 (Enzyme Nomenclature)
Acy1
GeneProduct
300981 (Entrez Gene)
Arg1
GeneProduct
29221 (Entrez Gene)
Arg2
GeneProduct
29215 (Entrez Gene)
Arginine
Metabolite
227 (Chemspider)
L-Arginine
Asl
GeneProduct
59085 (Entrez Gene)
Ass
GeneProduct
25698 (Entrez Gene)
C03406
Metabolite
C03406 (KEGG Compound)
N-(L-Arginino)succinate
CO2
Metabolite
CO2
Carbamoyl
Metabolite
Carbamoyl
Ckb
GeneProduct
24264 (Entrez Gene)
Ckm
GeneProduct
24265 (Entrez Gene)
Cps1
GeneProduct
24956 (Entrez Gene)
Creatine
Metabolite
566 (Chemspider)
Creatine
Creatinine
Metabolite
Creatinine
Formaldehyde
Metabolite
692 (Chemspider)
Formaldehyde
Formate
Metabolite
277 (Chemspider)
Formate
Fumarate
Metabolite
144248 (Chemspider)
Fumarate
Gamt
GeneProduct
25257 (Entrez Gene)
Gatm
GeneProduct
81660 (Entrez Gene)
Glud1
GeneProduct
24399 (Entrez Gene)
Guanidinoacetate
Metabolite
10707243 (Chemspider)
Guanidinoacetate
L-Aspartate
Metabolite
3714789 (Chemspider)
L-Aspartate
L-Citrulline
Metabolite
810 (Chemspider)
L-Citrulline
L-Glutamate- 5-semialdehyde
Metabolite
L-Glutamate
Metabolite
4302384 (Chemspider)
L-Glutamate
L-Glutamyl
Metabolite
L-Glutamyl
L-Ornithine
Metabolite
380 (Chemspider)
L-Ornithine
L-Proline
Metabolite
L-Proline
LOC303563
GeneProduct
303563 (Entrez Gene)
LOC363469
GeneProduct
363469 (Entrez Gene)
N-Acetyl-L-glutamate
Metabolite
10626897 (Chemspider)
N-Acetyl-L-glutamate
N-Acetyl-glutamate
Metabolite
10626897 (Chemspider)
N-Acetyl-L-glutamate
N-Carbamoylsarcosine
Metabolite
388495 (Chemspider)
N-Carbamoylsarcosine
N-Methylhydantoin
Metabolite
62430 (Chemspider)
N-Methylhydantoin
N2-Acetyl-L-ornithine
Metabolite
N2-Acetyl-L-ornithine
NH3
Metabolite
NH3
Oat
GeneProduct
64313 (Entrez Gene)
Odc1
GeneProduct
24609 (Entrez Gene)
Otc
GeneProduct
25611 (Entrez Gene)
Phosphoguanidinoacetate
Metabolite
19992631 (Chemspider)
Phosphoguanidinoacetate
Putrescine
Metabolite
13837702 (Chemspider)
Putrescine
Pycr1
GeneProduct
287877 (Entrez Gene)
Pycrl
GeneProduct
300035 (Entrez Gene)
Pycs
GeneProduct
361755 (Entrez Gene)
Sarcosine
Metabolite
1057 (Chemspider)
Sarcosine
Spermidine
Metabolite
1071 (Chemspider)
Spermidine
Spermine
Metabolite
1072 (Chemspider)
Spermine
Srm
GeneProduct
84596 (Entrez Gene)
Urea-1-carboxylate
Metabolite
Urea-1-carboxylate
Urea
Metabolite
1143 (Chemspider)
Urea
creatine-P
Metabolite
Phosphocreatine
Annotated Interactions
No annotated interactions
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