Methylerythritol phosphate pathway (Oryza sativa)
From WikiPathways
Description
In plants, the 2-C-methyl-d-erythritol 4-phosphate (MEP) pathway located in the plastids provides precursors for the isoprenoid hormones, monoterpenes, carotenoids and chlorophyll side chains, prenylquinones and tocopherol biosynthesis.
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DataNodes
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Name | Type | Database reference | Comment |
---|---|---|---|
1-deoxy-D-xylulose 5-phosphate | Metabolite | C11437 (Kegg Compound) ![]() | |
1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate | Metabolite | C11811 (Kegg Compound) ![]() | |
2-C-methyl-D-erythritol-2,4-cyclodiphosphate | Metabolite | C11453 (Kegg Compound) ![]() | |
2-C-methyl-D-erythritol-4-phosphate | Metabolite | C11434 (Kegg Compound) ![]() | |
2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol | Metabolite | ||
4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol | Metabolite | C11435 (Kegg Compound) ![]() | |
ADP | Metabolite | 58-64-0 (CAS) ![]() | |
ATP | Metabolite | 56-65-5 (CAS) ![]() | |
CMP | Metabolite | 63-37-6 (CAS) ![]() | |
CO2 | Metabolite | 124-38-9 (CAS) ![]() | |
CTP | Metabolite | 65-47-4 (CAS) ![]() | |
D-glyceraldehyde-3-phosphate | Metabolite | 142-10-9 (CAS) ![]() | |
EC:1.1.1.267 | GeneProduct | 1.1.1.267 (EC Number) ![]() | |
EC:1.17.1.2 | GeneProduct | 1.17.1.2 (EC Number) ![]() | |
EC:1.17.4.3 | GeneProduct | 1.17.4.3 (EC Number) ![]() | |
EC:2.2.1.7 | GeneProduct | 2.2.1.7 (EC Number) ![]() | |
EC:2.7.1.148 | GeneProduct | 2.7.1.148 (EC Number) ![]() | |
EC:2.7.7.60 | GeneProduct | 2.7.7.60 (EC Number) ![]() | |
EC:4.6.1.12 | GeneProduct | 4.6.1.12 (EC Number) ![]() | |
EC:5.3.3.2 | GeneProduct | 5.3.3.2 (EC Number) ![]() | |
H+ | Metabolite | 12408-02-5 (CAS) ![]() | |
H2O | Metabolite | 7732-18-5 (CAS) ![]() | |
LOC_Os01g01710 | GeneProduct | LOC_Os01g01710 (Gramene Rice) ![]() | 1-deoxy-D-xylulose 5-phosphate reductoisomerase, chloroplast precursor, putative, expressed//isoprenoid biosynthetic process//catalytic activity//1-deoxy-D-xylulose-5-phosphate reductoisomerase |
LOC_Os01g58790 | GeneProduct | LOC_Os01g58790 (Gramene Rice) ![]() | GHMP kinases ATP-binding protein, putative, expressed//ATP binding//terpenoid biosynthetic process//4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase |
LOC_Os01g66360 | GeneProduct | LOC_Os01g66360 (Gramene Rice) ![]() | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase, putative, expressed//terpenoid biosynthetic process//4-diphosphocytidyl-2C-methyl-D-erythritol synthase |
LOC_Os02g39160 | GeneProduct | LOC_Os02g39160 (Gramene Rice) ![]() | hydroxymethylbutenyl 4-diphosphate synthase, putative, expressed//terpenoid biosynthetic process//sugar:hydrogen symporter activity//phosphoenolpyruvate-dependent sugar phosphotransferase system//4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase |
LOC_Os02g45660 | GeneProduct | LOC_Os02g45660 (Gramene Rice) ![]() | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, chloroplast precursor, putative, expressed//terpenoid biosynthetic process//2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase |
LOC_Os03g52170 | GeneProduct | LOC_Os03g52170 (Gramene Rice) ![]() | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase, putative, expressed//terpenoid biosynthetic process |
LOC_Os05g33840 | GeneProduct | LOC_Os05g33840 (Gramene Rice) ![]() | transketolase, putative, expressed//terpenoid biosynthetic process//1-deoxy-D-xylulose-5-phosphate synthase//transketolase |
LOC_Os05g34180 | GeneProduct | LOC_Os05g34180 (Gramene Rice) ![]() | hydrolase, NUDIX family, domain containing protein, expressed//isoprenoid biosynthetic process//terpenoid biosynthetic process//isopentenyl-diphosphate delta-isomerase |
LOC_Os06g05100 | GeneProduct | LOC_Os06g05100 (Gramene Rice) ![]() | transketolase, putative, expressed//terpenoid biosynthetic process//1-deoxy-D-xylulose-5-phosphate synthase |
LOC_Os07g09190 | GeneProduct | LOC_Os07g09190 (Gramene Rice) ![]() | transketolase, putative, expressed//terpenoid biosynthetic process |
LOC_Os07g36190 | GeneProduct | LOC_Os07g36190 (Gramene Rice) ![]() | hydrolase, NUDIX family, domain containing protein, expressed//isopentenyl-diphosphate delta-isomerase |
LOC_Os07g40260 | GeneProduct | LOC_Os07g40260 (Gramene Rice) ![]() | eukaryotic aspartyl protease domain containing protein, expressed |
NAD(P)+ | Metabolite | 53-59-8 (CAS) ![]() | |
NAD(P)H | Metabolite | 2646-71-1 (CAS) ![]() | |
NADP+ | Metabolite | 53-59-8 (CAS) ![]() | |
NADPH | Metabolite | 2646-71-1 (CAS) ![]() | |
dimethylallyl-PP | Metabolite | 358-71-4 (CAS) ![]() | |
diphosphate | Metabolite | 2466-09-3 | |
geranylgeranyldiphosphate biosynthesis II (plastidic) | Pathway | WP2211 (WikiPathways) ![]() | |
phytyl-PP biosynthesis | Pathway | ||
polyisoprenoid biosynthesis | Pathway | ||
protein disulfide | Metabolite | ||
protein dithiol | Metabolite | ||
pyruvate | Metabolite | 127-17-3 (CAS) ![]() | |
Δ3-isopentenyl-PP | Metabolite | C00129 (Kegg Compound) ![]() |
Annotated Interactions
No annotated interactions