WikiPathways

From WikiPathways

(Difference between revisions)
Jump to: navigation, search
(update curator of the week)
(Dec release)
Line 95: Line 95:
<h2 class="frontPagePanel blueFg">Curator of the Week</h2>{{#imgLink:Alexander_Pico.jpg|70|center|||http://www.wikipathways.org/index.php/User:AlexanderPico|Alexander Pico}} [http://www.wikipathways.org/index.php/User:AlexanderPico Alexander Pico (Gladstone Institutes)]
<h2 class="frontPagePanel blueFg">Curator of the Week</h2>{{#imgLink:Alexander_Pico.jpg|70|center|||http://www.wikipathways.org/index.php/User:AlexanderPico|Alexander Pico}} [http://www.wikipathways.org/index.php/User:AlexanderPico Alexander Pico (Gladstone Institutes)]
<h2 class="frontPagePanel blueFg" style="margin-top:0.5em;">Updates</h2>
<h2 class="frontPagePanel blueFg" style="margin-top:0.5em;">Updates</h2>
 +
* '''December 2021 Release''': [[Special:RecentPathwayChanges|247 edits]] by [[WikiPathways:Statistics#Contribution_scores|17 contributors]] and [[WikiPathways:NewPathwayReleases#December_2021|4 new pathways]]'''.
* '''November 2021 Release''': [[Special:RecentPathwayChanges|55 edits]] by [[WikiPathways:Statistics#Contribution_scores|13 contributors]]'''.
* '''November 2021 Release''': [[Special:RecentPathwayChanges|55 edits]] by [[WikiPathways:Statistics#Contribution_scores|13 contributors]]'''.
* '''October 2021 Release''': [[Special:RecentPathwayChanges|54 edits]] by [[WikiPathways:Statistics#Contribution_scores|13 contributors]]'''.
* '''October 2021 Release''': [[Special:RecentPathwayChanges|54 edits]] by [[WikiPathways:Statistics#Contribution_scores|13 contributors]]'''.
Line 103: Line 104:
* '''May 2021 Release''': [[Special:RecentPathwayChanges|531 edits]] by [[WikiPathways:Statistics#Contribution_scores|27 contributors]] and [[WikiPathways:NewPathwayReleases#May_2021|6 new pathways]]'''.
* '''May 2021 Release''': [[Special:RecentPathwayChanges|531 edits]] by [[WikiPathways:Statistics#Contribution_scores|27 contributors]] and [[WikiPathways:NewPathwayReleases#May_2021|6 new pathways]]'''.
* '''April 2021 Release''': [[Special:RecentPathwayChanges|205 edits]] by [[WikiPathways:Statistics#Contribution_scores|16 contributors]] and [[WikiPathways:NewPathwayReleases#April_2021|3 new pathways]]'''.
* '''April 2021 Release''': [[Special:RecentPathwayChanges|205 edits]] by [[WikiPathways:Statistics#Contribution_scores|16 contributors]] and [[WikiPathways:NewPathwayReleases#April_2021|3 new pathways]]'''.
-
* '''March 2021 Release''': [[Special:RecentPathwayChanges|259 edits]] by [[WikiPathways:Statistics#Contribution_scores|19 contributors]] and [[WikiPathways:NewPathwayReleases#March_2021|8 new pathways]]'''.
 
&nbsp;&nbsp;&nbsp;&nbsp;[[WikiPathways:Updates|more...]]
&nbsp;&nbsp;&nbsp;&nbsp;[[WikiPathways:Updates|more...]]
<h2 class="frontPagePanel blueFg">Discussions</h2><recentChanges class="blueBg" style="border:none" namespace='90' limit='2'></recentChanges>&nbsp;&nbsp;&nbsp;&nbsp;[[WikiPathways:Discussions|more...]]
<h2 class="frontPagePanel blueFg">Discussions</h2><recentChanges class="blueBg" style="border:none" namespace='90' limit='2'></recentChanges>&nbsp;&nbsp;&nbsp;&nbsp;[[WikiPathways:Discussions|more...]]

Revision as of 22:49, 13 December 2021

Share your pathway knowledge in the fight against COVID-19

ACCESS the rapidly growing collection of COVID-19 pathways, CONTRIBUTE your time and domain knowledge about pathway biology as a pathway author, and USE these pathways in your research.

Welcome to WikiPathways

WikiPathways is a database of biological pathways maintained by and for the scientific community.

Read about our 12-year journey so far and official exit from beta or our 2021 NAR paper

Find Pathways

Search

 Browse

Browse by species and category

You can search by:
  • Pathway name (Apoptosis)
  • Gene or protein name (p53)
  • Any page content (cancer)

Get Pathways

Download

Multiple formats and methods

Growth

New pathways added each month

Edit Pathways

Learn

Play with the editor tools

Request

Queue figures for conversion

We want your feedback! A quick survey to help us focus development: https://www.surveymonkey.com/r/wikipathways

Today's Featured Pathway

SARS coronavirus and innate immunity (Homo sapiens)
invalid pathway title: exception 'Exception' with message 'Unable to convert to /var/www/wikipathways/images/9/92/WP4912_120539.svg:
Status:1
Message:Exception in thread "main" java.lang.NullPointerException at org.pathvisio.core.Engine.getPathwayImporters(Unknown Source) at org.pathvisio.core.Engine.importPathway(Unknown Source) at org.pathvisio.core.util.Converter.main(Unknown Source)


Command:java -Xmx1024M -jar /var/www/wikipathways/wpi/bin/pathvisio_core.jar "/var/www/wikipathways" "/var/www/wikipathways/images/9/92/WP4912_120539.svg" 2>&1
' in /var/www/wikipathways/wpi/extensions/Pathways/Pathway.php:1255 Stack trace:

  1. 0 /var/www/wikipathways/wpi/extensions/Pathways/Pathway.php(1227): Pathway::convertWithPathVisio(false, '/var/www/wikipa...')
  2. 1 /var/www/wikipathways/wpi/extensions/Pathways/Pathway.php(1137): Pathway->saveConvertedByPathVisioCache('svg')
  3. 2 /var/www/wikipathways/wpi/extensions/Pathways/Pathway.php(1153): Pathway->updateCache('svg')
  4. 3 /var/www/wikipathways/wpi/extensions/pathwayThumb.php(129): Pathway->getImage()
  5. 4 /var/www/wikipathways/wpi/extensions/pathwayThumb.php(53): makeThumbLinkObj(Object(Pathway), 'SARS coronaviru...', 'https://classic...', 'SARS coronaviru...', 'center', 'pwthumb', '300')
  6. 5 [internal function]: renderPathwayImage(Object(Parser), 'Pathway:WP4912', '300', 'center', 'SARS coronaviru...', 'pathway', 'SARS coronaviru...')
  7. 6 /var/www/wikipathways/includes/parser/Parser.php(2860): call_user_func_array('renderPathwayIm...', Array)
  8. 7 /var/www/wikipathways/includes/parser/Preprocessor_DOM.php(915): Parser->braceSubstitution(Array, Object(PPTemplateFrame_DOM))
  9. 8 /var/www/wikipathways/includes/parser/Parser.php(2986): PPFrame_DOM->expand(Object(PPNode_DOM))
  10. 9 /var/www/wikipathways/includes/parser/Preprocessor_DOM.php(915): Parser->braceSubstitution(Array, Object(PPFrame_DOM))
  11. 10 /var/www/wikipathways/includes/parser/Parser.php(2678): PPFrame_DOM->expand(Object(PPNode_DOM), 0)
  12. 11 /var/www/wikipathways/includes/parser/Parser.php(966): Parser->replaceVariables('{{Template:Toda...')
  13. 12 /var/www/wikipathways/includes/parser/Parser.php(439): Parser->internalParse('{{Template:Toda...')
  14. 13 /var/www/wikipathways/wpi/extensions/PathwayOfTheDay/PathwayOfTheDay.php(60): Parser->recursiveTagParse('{{Template:Toda...')
  15. 14 [internal function]: getPathwayOfTheDay(Object(Parser), 'Friday 3 May 20...', 'Curation:Curren...', 'true')
  16. 15 /var/www/wikipathways/includes/parser/Parser.php(2860): call_user_func_array('getPathwayOfThe...', Array)
  17. 16 /var/www/wikipathways/includes/parser/Preprocessor_DOM.php(915): Parser->braceSubstitution(Array, Object(PPFrame_DOM))
  18. 17 /var/www/wikipathways/includes/parser/Parser.php(2678): PPFrame_DOM->expand(Object(PPNode_DOM), 0)
  19. 18 /var/www/wikipathways/includes/parser/Parser.php(966): Parser->replaceVariables('{| ?<!-- Specia...')
  20. 19 /var/www/wikipathways/includes/parser/Parser.php(321): Parser->internalParse('{| ?<!-- Specia...')
  21. 20 /var/www/wikipathways/includes/OutputPage.php(405): Parser->parse('{| ?<!-- Specia...', Object(Title), Object(ParserOptions), true, true, 120541)
  22. 21 /var/www/wikipathways/includes/OutputPage.php(391): OutputPage->addWikiTextTitle('{| ?<!-- Specia...', Object(Title), true, true)
  23. 22 /var/www/wikipathways/includes/OutputPage.php(500): OutputPage->addWikiTextTitleTidy('{| ?<!-- Specia...', Object(Title), true)
  24. 23 /var/www/wikipathways/includes/DifferenceEngine.php(313): OutputPage->addWikiTextTidy('{| ?<!-- Specia...')
  25. 24 /var/www/wikipathways/includes/DifferenceEngine.php(271): DifferenceEngine->renderNewRevision()
  26. 25 /var/www/wikipathways/includes/Article.php(729): DifferenceEngine->showDiffPage(false)
  27. 26 /var/www/wikipathways/includes/Wiki.php(437): Article->view()
  28. 27 /var/www/wikipathways/includes/Wiki.php(59): MediaWiki->performAction(Object(OutputPage), Object(Article), Object(Title), Object(User), Object(WebRequest))
  29. 28 /var/www/wikipathways/index.php(93): MediaWiki->initialize(Object(Title), Object(Article), Object(OutputPage), Object(User), Object(WebRequest))
  30. 29 {main}

Curator of the Week

Alexander Pico (Gladstone Institutes)

Updates

    more...

Discussions

No recent changes    more...

Forum

        Google group wikipathways-discuss


    Retrieved from "https://classic.wikipathways.org/index.php/WikiPathways"
    Personal tools