Development

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== WikiPathways Organization ==
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== WikiPathways development ==
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This document defines the scope, roles and processes involved in the WikiPathways project:
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As an open source project, we welcome new developers at all levels. Please visit our repo at
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* [[media:WikiPathways_Organization.pdf|WikiPathways_Organization.pdf]]
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https://github.com/wikipathways/wikipathways.org. Built upon MediaWiki,
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the site includes numerous custom extensions, javascript, skins and hacks.
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== WikiPathways development ==
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=== How to Contribute ===
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Developer information, a roadmap and bugs can be found at:
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* For all potential [https://github.com/wikipathways/wikipathways.org/blob/master/CONTRIBUTING.md Contributors]
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* http://www.pathvisio.org/
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* The project [https://github.com/wikipathways/wikipathways.org/blob/master/README.md Readme]
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* The project [https://github.com/wikipathways/wikipathways.org/blob/master/ROADMAP.md Roadmap]
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* Our community [https://github.com/wikipathways/wikipathways.org/blob/master/CODEOFCONDUCT.md Code of Conduct]
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* Our organization [https://github.com/wikipathways/wikipathways.org/blob/master/SOP.md SOP]
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* Developer information for the Java-based Pathvisio application: http://developers.pathvisio.org/
* [https://www.google.com/calendar/ical/e3v5j4msn3f0gurkkfobd3gau0%40group.calendar.google.com/public/basic.ics Meeting schedule (Google Calendar)]
* [https://www.google.com/calendar/ical/e3v5j4msn3f0gurkkfobd3gau0%40group.calendar.google.com/public/basic.ics Meeting schedule (Google Calendar)]
== Web Service ==
== Web Service ==
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See the [[:Help:WikiPathways Webservice|WikiPathways Web Service page]] for <span class="plainlinks">[http://mycaal.com/ <span style="color:black;font-weight:normal; text-decoration:none!important; background:none!important; text-decoration:none;">loan modification</span>] information on how to access WikiPathways programatically.
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See the [[:Help:WikiPathways Webservice|WikiPathways Web Service page]] for information on how to access WikiPathways programatically.
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== Sparql queries ==
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See the [[:Help:WikiPathways Sparql queries|WikiPathways sparql queries]] for example queries to interact with WikiPathways sparql query
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== WikiPathways team ==
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* '''Founders:''' [[#Thomas A.J. Kelder|Thomas A.J. Kelder]], [[#Alexander R. Pico|Alexander R. Pico]], [[#Martijn van Iersel|Martijn van Iersel]], [[#Kristina Hanspers|Kristina Hanspers]], [[#Bruce R. Conklin|Bruce R. Conklin]], [[#Chris T. Evelo|Chris T. Evelo]]
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* '''Current developers:''' [[#Alexander R. Pico|Alexander R. Pico]], [[#Martijn van Iersel|Martijn van Iersel]], [[#Kristina Hanspers|Kristina Hanspers]], [[#Martina Kutmon|Martina Kutmon]], [[#Andra Waagmeester|Andra Waagmeester]]
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* '''Contributors:''' [[User:Ademcan|Adem Bilican]], [[User:Pjaiswal|Pankaj Jaiswal]], [http://leapon.net/ Leontius Pradhana], Guanming Wu, Chetan Bansal, Mark Woon, Rebecca Tang
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* '''Curators:''' [[User:Susan|Susan Coort]], [[User:Samuel Sklar|Samuel Sklar]], [[User:Pieter_Giesbertz|Pieter Giesbertz]], [[User:Kdahlquist|Kam Dahlquist]], [[User:Michiel|Michiel Adriaens]], [[User:Pjaiswal|Pankaj Jaiswal]], [[User:Piet|Piet Molenaar]], [http://www.netpath.org/ NetPath group]
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==== Thomas A.J. Kelder ====
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{|
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|[[Image:Thomas.jpg|left|50px|caption]]
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* Co-founder
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* Developer
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* Scientist Bioinformatics, [http://www.tno.nl/ TNO]
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|}
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==== Alexander R. Pico ====
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{|
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|[[Image:Alex.jpg|left|60px|caption]]
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* Co-founder
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* Developer
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* Bioinformatics Group Leader at [http://www.gladstone.ucsf.edu Gladstone Institutes]
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|}
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==== Martijn van Iersel ====
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== SPARQL queries ==
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{|
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See the [[:Help:WikiPathways Sparql queries|WikiPathways SPARQL queries]] for example queries to interact with WikiPathways SPARQL query
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|[[Image:Martijn.jpg|left|60px|caption]]
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|
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* Co-founder
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* Developer
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* Post-doc at [http://www.ebi.ac.uk/ EBI]
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|}
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==== Kristina Hanspers ====
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== Project Monitoring ==
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{|
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* [https://jenkins.bigcat.unimaas.nl/job/Website%20Monitoring/ Website tests]
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|[[Image:Kristina.jpg|left|50px|caption]]
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* [https://jenkins.bigcat.unimaas.nl/job/PathVisio/ PathVisio]
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* [https://jenkins.bigcat.unimaas.nl/job/rwikipathways/ rWikiPathways]
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* Co-founder
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* Developer
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* Research Associate at the [http://www.gladstone.ucsf.edu Gladstone Institute]
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|}
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==== Martina Kutmon ====
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{|
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|[[Image:Tina.jpg|left|50px|caption]]
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* Developer
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* PhD researcher at [http://www.bigcat.unimaas.nl/index.html Maastricht University]
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==== Andra Waagmeester ====
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== WikiPathways Team ==
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{|
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Find information about the organizational structure and the '''[[WikiPathways:Team|WikiPathways team]]'''.
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|[[Image:Andra.jpg|left|50px|caption]]
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* Developer
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* PhD researcher at [http://www.bigcat.unimaas.nl/index.html Maastricht University]
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==== Bruce R. Conklin ====
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{|
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|[[Image: Bruce.jpg|left|50px|caption]]
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* Co-founder
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* Senior investigator at the [http://www.gladstone.ucsf.edu/gladstone/site/conklin/ Gladstone Institutes]]
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==== Chris T. Evelo ====
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{|
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|[[Image:Chris.jpg|left|50px|caption]]
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* Co-founder
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* Head of the Department of Bioinformatics – BiGCaT at [http://www.bigcat.unimaas.nl/people/index.html Maastricht University]
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|}
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== Developer and administrator pages ==
== Developer and administrator pages ==
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* [[Special:ListUsers | User snoop]]
* [[Special:ListUsers | User snoop]]
* [[Bots]]  
* [[Bots]]  
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* [[News_archive]]
 
* [[Special:SpecialCurationTags|Overview of curation tags]]
* [[Special:SpecialCurationTags|Overview of curation tags]]

Current revision

Contents

WikiPathways development

As an open source project, we welcome new developers at all levels. Please visit our repo at https://github.com/wikipathways/wikipathways.org. Built upon MediaWiki, the site includes numerous custom extensions, javascript, skins and hacks.

How to Contribute

Web Service

See the WikiPathways Web Service page for information on how to access WikiPathways programatically.

SPARQL queries

See the WikiPathways SPARQL queries for example queries to interact with WikiPathways SPARQL query

Project Monitoring

WikiPathways Team

Find information about the organizational structure and the WikiPathways team.

Developer and administrator pages

Retrieved from "https://classic.wikipathways.org/index.php/Development"
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