WikiPathways

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<h2 class="frontPagePanel blueFg">Curator of the Week</h2>{{#imgLink:AndraWaagmeester.png‎|70|center|||http://www.wikipathways.org/index.php/User:Andra|Andra Waagmeester}} [http://www.wikipathways.org/index.php/User:Andra Andra Waagmeester (Gene Wiki)]
<h2 class="frontPagePanel blueFg">Curator of the Week</h2>{{#imgLink:AndraWaagmeester.png‎|70|center|||http://www.wikipathways.org/index.php/User:Andra|Andra Waagmeester}} [http://www.wikipathways.org/index.php/User:Andra Andra Waagmeester (Gene Wiki)]
<h2 class="frontPagePanel blueFg" style="margin-top:0.5em;">Updates</h2>
<h2 class="frontPagePanel blueFg" style="margin-top:0.5em;">Updates</h2>
 +
* '''September 2020 Release''': [[Special:RecentPathwayChanges|125 edits]] by [[WikiPathways:Statistics#Contribution_scores|11 contributors]] and [[WikiPathways:NewPathwayReleases#September_2020|3 new pathways]]'''.
* '''August 2020 Release''': [[Special:RecentPathwayChanges|165 edits]] by [[WikiPathways:Statistics#Contribution_scores|21 contributors]] and [[WikiPathways:NewPathwayReleases#August_2020|1 new pathway]]'''.
* '''August 2020 Release''': [[Special:RecentPathwayChanges|165 edits]] by [[WikiPathways:Statistics#Contribution_scores|21 contributors]] and [[WikiPathways:NewPathwayReleases#August_2020|1 new pathway]]'''.
* '''July 2020 Release''': [[Special:RecentPathwayChanges|151 edits]] by [[WikiPathways:Statistics#Contribution_scores|12 contributors]] and [[WikiPathways:NewPathwayReleases#July_2020|4 new pathways]]'''.
* '''July 2020 Release''': [[Special:RecentPathwayChanges|151 edits]] by [[WikiPathways:Statistics#Contribution_scores|12 contributors]] and [[WikiPathways:NewPathwayReleases#July_2020|4 new pathways]]'''.
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* '''March 2020 Release''': [[Special:RecentPathwayChanges|167 edits]] by [[WikiPathways:Statistics#Contribution_scores|27 contributors]] and [[WikiPathways:NewPathwayReleases#March_2020|9 new pathways]]
* '''March 2020 Release''': [[Special:RecentPathwayChanges|167 edits]] by [[WikiPathways:Statistics#Contribution_scores|27 contributors]] and [[WikiPathways:NewPathwayReleases#March_2020|9 new pathways]]
* '''February 2020 Release''': [[Special:RecentPathwayChanges|193 edits]] by [[WikiPathways:Statistics#Contribution_scores|24 contributors]] and [[WikiPathways:NewPathwayReleases#February_2020|3 new pathways]]
* '''February 2020 Release''': [[Special:RecentPathwayChanges|193 edits]] by [[WikiPathways:Statistics#Contribution_scores|24 contributors]] and [[WikiPathways:NewPathwayReleases#February_2020|3 new pathways]]
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* '''January 2020 Release''': [[Special:RecentPathwayChanges|96 edits]] by [[WikiPathways:Statistics#Contribution_scores|17 contributors]] and [[WikiPathways:NewPathwayReleases#January_2020|9 new pathways]]
 
&nbsp;&nbsp;&nbsp;&nbsp;[[WikiPathways:Updates|more...]]
&nbsp;&nbsp;&nbsp;&nbsp;[[WikiPathways:Updates|more...]]
<h2 class="frontPagePanel blueFg">Discussions</h2><recentChanges class="blueBg" style="border:none" namespace='90' limit='2'></recentChanges>&nbsp;&nbsp;&nbsp;&nbsp;[[WikiPathways:Discussions|more...]]
<h2 class="frontPagePanel blueFg">Discussions</h2><recentChanges class="blueBg" style="border:none" namespace='90' limit='2'></recentChanges>&nbsp;&nbsp;&nbsp;&nbsp;[[WikiPathways:Discussions|more...]]

Revision as of 20:55, 10 September 2020

Share your pathway knowledge in the fight against COVID-19

ACCESS the rapidly growing collection of COVID-19 pathways, CONTRIBUTE your time and domain knowledge about pathway biology as a pathway author, and USE these pathways in your research.

Welcome to WikiPathways

WikiPathways is a database of biological pathways maintained by and for the scientific community.

Read about our 12-year journey so far and official exit from beta.

Find Pathways

Search

 Browse

Browse by species and category

You can search by:
  • Pathway name (Apoptosis)
  • Gene or protein name (p53)
  • Any page content (cancer)

Get Pathways

Download

Multiple formats and methods

Growth

New pathways added each month

Edit Pathways

Learn

Play with the editor tools

Convert

Queue figures for conversion

We want your feedback! A quick survey to help us focus development: https://www.surveymonkey.com/r/wikipathways

Today's Featured Pathway

COVID-19 adverse outcome pathway (Homo sapiens)
invalid pathway title: exception 'Exception' with message 'Unable to convert to /var/www/wikipathways/images/5/5d/WP4891_111806.svg:
Status:1
Message:Exception in thread "main" java.lang.NullPointerException at org.pathvisio.core.Engine.getPathwayImporters(Unknown Source) at org.pathvisio.core.Engine.importPathway(Unknown Source) at org.pathvisio.core.util.Converter.main(Unknown Source)


Command:java -Xmx1024M -jar /var/www/wikipathways/wpi/bin/pathvisio_core.jar "/var/www/wikipathways" "/var/www/wikipathways/images/5/5d/WP4891_111806.svg" 2>&1
' in /var/www/wikipathways/wpi/extensions/Pathways/Pathway.php:1255 Stack trace:

  1. 0 /var/www/wikipathways/wpi/extensions/Pathways/Pathway.php(1227): Pathway::convertWithPathVisio(false, '/var/www/wikipa...')
  2. 1 /var/www/wikipathways/wpi/extensions/Pathways/Pathway.php(1137): Pathway->saveConvertedByPathVisioCache('svg')
  3. 2 /var/www/wikipathways/wpi/extensions/Pathways/Pathway.php(1153): Pathway->updateCache('svg')
  4. 3 /var/www/wikipathways/wpi/extensions/pathwayThumb.php(129): Pathway->getImage()
  5. 4 /var/www/wikipathways/wpi/extensions/pathwayThumb.php(53): makeThumbLinkObj(Object(Pathway), 'COVID-19 advers...', 'https://classic...', 'COVID-19 advers...', 'center', 'pwthumb', '300')
  6. 5 [internal function]: renderPathwayImage(Object(Parser), 'Pathway:WP4891', '300', 'center', 'COVID-19 advers...', 'pathway', 'COVID-19 advers...')
  7. 6 /var/www/wikipathways/includes/parser/Parser.php(2860): call_user_func_array('renderPathwayIm...', Array)
  8. 7 /var/www/wikipathways/includes/parser/Preprocessor_DOM.php(915): Parser->braceSubstitution(Array, Object(PPTemplateFrame_DOM))
  9. 8 /var/www/wikipathways/includes/parser/Parser.php(2986): PPFrame_DOM->expand(Object(PPNode_DOM))
  10. 9 /var/www/wikipathways/includes/parser/Preprocessor_DOM.php(915): Parser->braceSubstitution(Array, Object(PPFrame_DOM))
  11. 10 /var/www/wikipathways/includes/parser/Parser.php(2678): PPFrame_DOM->expand(Object(PPNode_DOM), 0)
  12. 11 /var/www/wikipathways/includes/parser/Parser.php(966): Parser->replaceVariables('{{Template:Toda...')
  13. 12 /var/www/wikipathways/includes/parser/Parser.php(439): Parser->internalParse('{{Template:Toda...')
  14. 13 /var/www/wikipathways/wpi/extensions/PathwayOfTheDay/PathwayOfTheDay.php(60): Parser->recursiveTagParse('{{Template:Toda...')
  15. 14 [internal function]: getPathwayOfTheDay(Object(Parser), 'Friday 3 May 20...', 'Curation:Curren...', 'true')
  16. 15 /var/www/wikipathways/includes/parser/Parser.php(2860): call_user_func_array('getPathwayOfThe...', Array)
  17. 16 /var/www/wikipathways/includes/parser/Preprocessor_DOM.php(915): Parser->braceSubstitution(Array, Object(PPFrame_DOM))
  18. 17 /var/www/wikipathways/includes/parser/Parser.php(2678): PPFrame_DOM->expand(Object(PPNode_DOM), 0)
  19. 18 /var/www/wikipathways/includes/parser/Parser.php(966): Parser->replaceVariables('{| ?<!-- Specia...')
  20. 19 /var/www/wikipathways/includes/parser/Parser.php(321): Parser->internalParse('{| ?<!-- Specia...')
  21. 20 /var/www/wikipathways/includes/OutputPage.php(405): Parser->parse('{| ?<!-- Specia...', Object(Title), Object(ParserOptions), true, true, 111915)
  22. 21 /var/www/wikipathways/includes/OutputPage.php(391): OutputPage->addWikiTextTitle('{| ?<!-- Specia...', Object(Title), true, true)
  23. 22 /var/www/wikipathways/includes/OutputPage.php(500): OutputPage->addWikiTextTitleTidy('{| ?<!-- Specia...', Object(Title), true)
  24. 23 /var/www/wikipathways/includes/DifferenceEngine.php(313): OutputPage->addWikiTextTidy('{| ?<!-- Specia...')
  25. 24 /var/www/wikipathways/includes/DifferenceEngine.php(271): DifferenceEngine->renderNewRevision()
  26. 25 /var/www/wikipathways/includes/Article.php(729): DifferenceEngine->showDiffPage(false)
  27. 26 /var/www/wikipathways/includes/Wiki.php(437): Article->view()
  28. 27 /var/www/wikipathways/includes/Wiki.php(59): MediaWiki->performAction(Object(OutputPage), Object(Article), Object(Title), Object(User), Object(WebRequest))
  29. 28 /var/www/wikipathways/index.php(93): MediaWiki->initialize(Object(Title), Object(Article), Object(OutputPage), Object(User), Object(WebRequest))
  30. 29 {main}

Curator of the Week

Andra Waagmeester (Gene Wiki)

Updates

    more...

Discussions

No recent changes    more...

Forum

        Google group wikipathways-discuss


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