Portal:Lipids/FeaturedPathways

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Classification based on [https://www.lipidmaps.org/data/classification/LM_classification_exp.php LIPIDMAPS Ontology].
Classification based on [https://www.lipidmaps.org/data/classification/LM_classification_exp.php LIPIDMAPS Ontology].
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For the September 2022 RDF release, WikiPathways contains:
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{| class="wikitable sortable" style="float:left; margin-left: 10px;"
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! Class Name || Abbreviation || Unique Lipids || Unique Pws
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|-
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| Fatty Acyls || FA || 573 || 274
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|-
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| Glycerolipid || GL || 10 || 101
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|-
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| Glycerophospholipid || GP || 40 || 48
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|-
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| Sphingolipids || SP || 95 || 48
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|-
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| Sterol lipids || ST || 182 || 114
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|-
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| Prenol Lipids || PR || 50 || 65
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|-
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| Saccharolipids || SL || 0 || 0
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|-
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| Polyketides || PK || 21 || 18
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|-
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|}
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== Fatty Acyls [FA] ==  
== Fatty Acyls [FA] ==  
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|width=100px|{{#pwImage:Pathway:WP3933|250px||Kennedy pathway from Sphingolipids (Homo sapiens)}}
|width=100px|{{#pwImage:Pathway:WP3933|250px||Kennedy pathway from Sphingolipids (Homo sapiens)}}
|width=100px|{{#pwImage:Pathway:WP5179|250px||Biosynthesis and turnover of 1-deoxy-sphingoid bases (Homo sapiens)}}
|width=100px|{{#pwImage:Pathway:WP5179|250px||Biosynthesis and turnover of 1-deoxy-sphingoid bases (Homo sapiens)}}
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|}
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'''Bacteria'''
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* [[Pathway:WP5271]]  Bacterial ceramide synthesis (Caulobacter vibrioides)
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{| style="margin: 10px"
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|width=100px|{{#pwImage:Pathway:WP5271|250px||Bacterial ceramide synthesis (Caulobacter vibrioides)}}
|}
|}
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== Saccharolipids [SL] ==
== Saccharolipids [SL] ==
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See the [http://sparql.wikipathways.org/sparql?default-graph-uri=&query=select+count%28distinct+%3FlipidID%29+as+%3FIndividualLipidsPerClass_SL%0D%0Awhere+%7B+++++%3Fmetabolite+a+wp%3AMetabolite+%3B%0D%0A++++dcterms%3Aidentifier+%3Fid+%3B%0D%0A++++dcterms%3AisPartOf+%3FpathwayRes+%3B%0D%0A++++wp%3AbdbLipidMaps+%3FlipidID+.%0D%0A++%3FpathwayRes+a+wp%3APathway+%3B%0D%0A++++++++++++++wp%3AorganismName+%22Homo+sapiens%22%5E%5Exsd%3Astring+%3B+%0D%0A++++dcterms%3Aidentifier+%3Fwpid+%3B%0D%0A++++dc%3Atitle+%3Ftitle+.%0D%0A++FILTER+regex%28str%28%3FlipidID%29%2C+%22SL%22+%29.+%23Saccharolipids%0D%0A%7D&should-sponge=&format=text%2Fhtml&timeout=0&debug=on&run=+Run+Query+ Number] of Lipids in Humans for this Class and try out our [https://bit.ly/2MOjSJ2 SPARQL query]!
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No pathway yet for this class; feel free to contribute a pathway representing this lipid class!
== Polyketides [PK] ==
== Polyketides [PK] ==
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See the [http://sparql.wikipathways.org/sparql?default-graph-uri=&query=select+count%28distinct+%3FlipidID%29+as+%3FIndividualLipidsPerClass_PK%0D%0Awhere+%7B+++++%3Fmetabolite+a+wp%3AMetabolite+%3B%0D%0A++++dcterms%3Aidentifier+%3Fid+%3B%0D%0A++++dcterms%3AisPartOf+%3FpathwayRes+%3B%0D%0A++++wp%3AbdbLipidMaps+%3FlipidID+.%0D%0A++%3FpathwayRes+a+wp%3APathway+%3B%0D%0A++++++++++++++wp%3AorganismName+%22Homo+sapiens%22%5E%5Exsd%3Astring+%3B+%0D%0A++++dcterms%3Aidentifier+%3Fwpid+%3B%0D%0A++++dc%3Atitle+%3Ftitle+.%0D%0A++FILTER+regex%28str%28%3FlipidID%29%2C+%22PK%22+%29.+%23Polyketides%0D%0A%7D&should-sponge=&format=text%2Fhtml&timeout=0&debug=on&run=+Run+Query+ Number] of Lipids in Humans for this Class and try out our [https://bit.ly/3uOUYdi SPARQL query]!
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For September 2022, WikiPathways contains:
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- 21 unique Lipids for human pathways for this Class; try out our [https://bit.ly/3UyZPMO SPARQL query]!
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- 18 pathways for humans for this class; adapt the [https://bit.ly/3dwz6Q4 query] yourself in our SNORQL interface.
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* [[Pathway:WP4238]]  Flavan-3-ol metabolic pathway (Homo sapiens)
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{| style="margin: 10px"
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|width=100px|{{#pwImage:Pathway:WP4238|250px||Flavan-3-ol metabolic pathway (Homo sapiens)}}
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|}
== Signalling Pathways related to Lipids ==
== Signalling Pathways related to Lipids ==

Current revision

Classification based on LIPIDMAPS Ontology.

For the September 2022 RDF release, WikiPathways contains:

Class Name Abbreviation Unique Lipids Unique Pws
Fatty Acyls FA 573 274
Glycerolipid GL 10 101
Glycerophospholipid GP 40 48
Sphingolipids SP 95 48
Sterol lipids ST 182 114
Prenol Lipids PR 50 65
Saccharolipids SL 0 0
Polyketides PK 21 18


Contents

Fatty Acyls [FA]

For September 2022, WikiPathways contains:

- 573 unique Lipids for human pathways for this Class; try out our SPARQL query!

- 274 pathways for humans for this class; adapt the query yourself in our SNORQL interface.

Fatty Acids [FA01]


Image does not exist
Omega 3 & 6 FA synthesis (Mus musculus)
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Omega 9 and saturated FA synthesis (Mus musculus)

Octadecanoids [FA02]

Eicosanoids [FA03]


Image does not exist
Eicosanoid Synthesis (Homo sapiens)
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Eicosanoid metabolism via Cyclo Oxygenases (COX) (Mus musculus)
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Eicosanoid metabolism via Lipo Oxygenases (LOX) (Mus musculus)
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Eicosanoid metabolism via Cytochrome P450 Mono-Oxygenases (CYP) (Mus musculus)

Glycerolipids [GL]

For September 2022, WikiPathways contains:

- 10 unique Lipids for human pathways for this Class; try out our SPARQL query!

- 101 pathways for humans for this class; adapt the query yourself in our SNORQL interface.


Image does not exist
Glycerolipids and Glycerophospholipids (Mus musculus)

Glycerophospholipids [GP]

For September 2022, WikiPathways contains:

- 40 unique Lipids for human pathways for this Class; try out our SPARQL query!

- 48 pathways for humans for this class; adapt the query yourself in our SNORQL interface.


Image does not exist
Glycerolipids and Glycerophospholipids (Mus musculus)
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Glycerophospholipid Biosynthetic Pathway (Homo sapiens)
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Ether lipid biosynthesis (Homo sapiens))

Glycerophosphoinositols [GP06]

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Phosphoinositides metabolism (Homo sapiens)

Sphingolipids [SP]

For September 2022, WikiPathways contains:

- 95 unique Lipids for human pathways for this Class; try out our SPARQL query!

- 48 pathways for humans for this class; adapt the query yourself in our SNORQL interface.

Mouse (Mus musculus)

Image does not exist
Sphingolipid Metabolism (Mus musculus)
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Spingolipids (integrated pathway) (Mus musculus)

Human (Homo sapiens)

  • Pathway:WP4142 Metabolism of Spingolipids in ER and Golgi apparatus (Homo sapiens)
  • Pathway:WP1423 Ganglio Sphingolipid Metabolism (Homo sapiens)
  • Pathway:WP4153 Degradation pathway of sphingolipids, including diseases (Homo sapiens)
  • Pathway:WP3933 Kennedy pathway from Sphingolipids (Homo sapiens)
  • Pathway:WP5179 Biosynthesis and turnover of 1-deoxy-sphingoid bases (Homo sapiens)
Image does not exist
Metabolism of Spingolipids in ER and Golgi apparatus (Homo sapiens)
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Ganglio Sphingolipid Metabolism (Homo sapiens)
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Degradation pathway of sphingolipids, including diseases (Homo sapiens)
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Kennedy pathway from Sphingolipids (Homo sapiens)
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Biosynthesis and turnover of 1-deoxy-sphingoid bases (Homo sapiens)


Bacteria

  • Pathway:WP5271 Bacterial ceramide synthesis (Caulobacter vibrioides)
Image does not exist
Bacterial ceramide synthesis (Caulobacter vibrioides)

Sterol Lipids [ST]

(Chole)sterols [ST01]

For September 2022, WikiPathways contains:

- 182 unique Lipids for human pathways for this Class; try out our SPARQL query!

- 114 pathways for humans for this class; adapt the query yourself in our SNORQL interface.

  • Pathway:WP430 Statin Pathway (Homo sapiens)
  • Pathway:WP4190 Mevalonate arm of cholesterol biosynthesis pathway (Homo sapiens)
  • Pathway:WP4189 Mevalonate arm of cholesterol biosynthesis pathway with inhibitors (Homo sapiens)
  • Pathway:WP4346 Cholesterol metabolism (includes both Bloch and Kandutsch-Russell pathways) from LipidMaps (Mus musculus) and Pathway:WP4718 for Homo Sapiens
  • Pathway:WP4545 Oxysterols derived from cholesterol (Homo sapiens)
Image does not exist
Statin Pathway (Homo sapiens)
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Mevalonate arm of cholesterol biosynthesis pathway (Homo sapiens)
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Mevalonate arm of cholesterol biosynthesis pathway with inhibitors (Homo sapiens)
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Cholesterol metabolism (includes both Bloch and Kandutsch-Russell pathways) (Mus musculus)
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Oxysterols derived from cholesterol (Homo sapiens)

Steroids [ST02]

  • Pathway:WP4523 Classical pathway of steroidogenesis with Glucocorticoid and Mineralocorticoid Metabolism (Homo sapiens)
  • Pathway:WP4524 The alternative pathway of fetal androgen synthesis (Homo sapiens)


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Classical pathway of steroidogenesis with Glucocorticoid and Mineralocorticoid Metabolism (Homo sapiens)
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The alternative pathway of fetal androgen synthesis (Homo sapiens)

Secosteroids [ST03]


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Vitamin D Metabolism (Homo sapiens))

Bile acids and derivatives [ST04]


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Oxysterols derived from cholesterol (Homo sapiens)

Prenol Lipids [PR]

For September 2022, WikiPathways contains:

- 50 unique Lipids for human pathways for this Class; try out our SPARQL query!

- 65 pathways for humans for this class; adapt the query yourself in our SNORQL interface.

Isoprenoids [PR01]

Image does not exist
Retinol metabolism (Homo sapiens)


Quinones and hydroquinones [PR02]

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Riboflavin and CoQ disorders (Homo sapiens)
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Activation of vitamin K-dependent proteins (Homo sapiens))

Saccharolipids [SL]

No pathway yet for this class; feel free to contribute a pathway representing this lipid class!

Polyketides [PK]

For September 2022, WikiPathways contains:

- 21 unique Lipids for human pathways for this Class; try out our SPARQL query!

- 18 pathways for humans for this class; adapt the query yourself in our SNORQL interface.



Image does not exist
Flavan-3-ol metabolic pathway (Homo sapiens)

Signalling Pathways related to Lipids

  • Pathway:WP3965 Lipid Metabolism Pathway (Homo sapiens)
  • Pathway:WP3601 Composition of Lipid Particles (Homo sapiens)
  • Pathway:WP4522 Metabolic pathway of LDL, HDL and TG, including diseases (Homo sapiens)
  • Pathway:WP5272 LDL- influence on CD14 and TLR4 (Homo sapiens)
  • Pathway:WP5191 Resolvin E1 and resolvin D1 signaling pathways promoting inflammation resolution (Homo sapiens)
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Lipid Metabolism Pathway (Homo sapiens)
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Composition of Lipid Particles (Homo sapiens)
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Metabolic pathway of LDL, HDL and TG, including diseases (Homo sapiens)
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LDL- influence on CD14 and TLR4 (Homo sapiens)
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Resolvin E1 and resolvin D1 signaling pathways promoting inflammation resolution (Homo sapiens)


  • Pathway:WP5192 Modulation of PI3K-Akt-mTOR signaling by bioactive sphingolipids (Homo sapiens)
  • Pathway:WP5182 Pro-survival signaling of neuroprotectin D1 (Homo sapiens)
  • Pathway:WP5181 Roles of ceramides in the development of insulin resistance (Homo sapiens)
  • Pathway:WP5199 PtdIns(4,5)P2 in cytokinesis pathway (Homo sapiens)
Image does not exist
Modulation of PI3K-Akt-mTOR signaling by bioactive sphingolipids (Homo sapiens)
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Pro-survival signaling of neuroprotectin D1 (Homo sapiens)
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Roles of ceramides in the development of insulin resistance (Homo sapiens)
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PtdIns(4,5)P2 in cytokinesis pathway (Homo sapiens)
Retrieved from "https://classic.wikipathways.org/index.php/Portal:Lipids/FeaturedPathways"
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