User:Egonw

From WikiPathways

Revision as of 10:39, 30 August 2013 (view source) Egonw (Talk | contribs) (→Xenobiotics Metabolism) ← Previous diff		Revision as of 15:33, 22 September 2013 (view source) Egonw (Talk | contribs) (→Random Access) Next diff →
Line 37:		Line 37:
	* [[Pathway:WP2360|Folate Biosynthesis (Bacillus subtilis)]]		* [[Pathway:WP2360|Folate Biosynthesis (Bacillus subtilis)]]
	* [[Pathway:WP2450|Camalexin synthesis (Arabidopsis thaliana)]]		* [[Pathway:WP2450|Camalexin synthesis (Arabidopsis thaliana)]]
		+
		+	=== Need More Metabolite Identifiers ===
		+
		+	* [[Pathway:WP79]]
		+	* [[Pathway:WP92]]
	== About Me ==		== About Me ==

---

Revision as of 15:33, 22 September 2013

Contents 1 My WikiPathways 2 My Curation 3 My Pathways 3.1 Histone Modifications 3.2 Nanotoxicology 3.3 Xenobiotics Metabolism 3.4 Random Access 3.5 Need More Metabolite Identifiers 4 About Me

My WikiPathways

• My contributions
• My talk page

My Curation

I am particularly interested in the metabolite bits in WikiPathways, and using Andra's SPARQL end point very much. Check these queries.

Additionally, I have started using Bioclipse for generating curation reports, such as this BSL script on myExperiment.org (aka workflow) to find GPML Label elements with IUPAC names for which there is a ChemSpider CSID.

My Pathways

Below are pathways I started because I found them interesting.

Histone Modifications

• Butyrate-induced histone acetylation (Homo sapiens)
• Histone modifications (Homo sapiens)

Nanotoxicology

• Nanomaterial induced apoptosis (Homo sapiens)
• Nanoparticle triggered autophagic cell death (Homo sapiens)
• Nanoparticle triggered regulated necrosis (Homo sapiens)

Xenobiotics Metabolism

• Diclofenac Metabolic Pathway (Homo sapiens)
• Colchicine Metabolic Pathway (Homo sapiens)
• Moxicylyte Metabolic Pathway (Homo sapiens)
• Methapyrilene Metabolic Pathway (Rattus norvegicus)
• Sulindac Metabolic Pathway (Rattus norvegicus) and Sulindac Metabolic Pathway (Homo sapiens)
• Dantrolene Metabolic Pathway (Mus musculus)

Other drug of which I am interested in the metabolism: amotidine, enalapril, and captopril.

Random Access

• Folate Biosynthesis (Bacillus subtilis)
• Camalexin synthesis (Arabidopsis thaliana)

Need More Metabolite Identifiers

• Pathway:WP79
• Pathway:WP92

About Me

• Real name: Egon Willighagen
• ORCID: 0000-0001-7542-0286
• Work: BiGCaT, Maastricht University
• Location: Maastricht
• Professional Interests: metabolomics
• Blog: http://chem-bla-ics.blogspot.com/